Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.65□□□□□ -1.5
VCLP18206 RPL36AP39-201ENST00000445859 318 ntBASIC5.65□□□□□ -1.5
VCLP18206 HMGN1P36-201ENST00000446623 298 ntBASIC5.65□□□□□ -1.5
VCLP18206 SETP20-201ENST00000457046 852 ntBASIC5.65□□□□□ -1.5
VCLP18206 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VCLP18206 AC087672.1-201ENST00000479876 766 ntBASIC5.65□□□□□ -1.5
VCLP18206 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.65□□□□□ -1.5
VCLP18206 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.65□□□□□ -1.5
VCLP18206 RNU6-615P-201ENST00000516065 106 ntBASIC5.65□□□□□ -1.5
VCLP18206 TMEM97P2-201ENST00000517841 403 ntBASIC5.65□□□□□ -1.5
VCLP18206 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.65□□□□□ -1.5
VCLP18206 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.65□□□□□ -1.5
VCLP18206 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.65□□□□□ -1.5
VCLP18206 AC010547.6-201ENST00000571789 193 ntBASIC5.65□□□□□ -1.5
VCLP18206 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.65□□□□□ -1.5
VCLP18206 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.65□□□□□ -1.5
VCLP18206 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.65□□□□□ -1.5
VCLP18206 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.65□□□□□ -1.5
VCLP18206 AP005431.1-201ENST00000618479 319 ntBASIC5.65□□□□□ -1.5
VCLP18206 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.65□□□□□ -1.5
VCLP18206 AC022919.1-201ENST00000624979 626 ntBASIC5.65□□□□□ -1.5
VCLP18206 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VCLP18206 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
VCLP18206 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
VCLP18206 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.65□□□□□ -1.51
VCLP18206 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
VCLP18206 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VCLP18206 AL360270.2-201ENST00000562952 5985 ntBASIC5.65□□□□□ -1.51
VCLP18206 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.65□□□□□ -1.51
VCLP18206 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.64□□□□□ -1.51
VCLP18206 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VCLP18206 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.64□□□□□ -1.51
VCLP18206 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 AC011933.2-201ENST00000578539 2790 ntBASIC5.64□□□□□ -1.51
VCLP18206 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 AC092376.2-201ENST00000622621 4116 ntBASIC5.64□□□□□ -1.51
VCLP18206 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 RMRPP5-201ENST00000411156 267 ntBASIC5.64□□□□□ -1.51
VCLP18206 GPS2P1-201ENST00000411761 986 ntBASIC5.64□□□□□ -1.51
VCLP18206 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.64□□□□□ -1.51
VCLP18206 AC064862.4-201ENST00000442180 334 ntBASIC5.64□□□□□ -1.51
VCLP18206 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.64□□□□□ -1.51
VCLP18206 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.64□□□□□ -1.51
VCLP18206 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.64□□□□□ -1.51
VCLP18206 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.64□□□□□ -1.51
VCLP18206 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.64□□□□□ -1.51
VCLP18206 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.64□□□□□ -1.51
VCLP18206 RPL32P33-201ENST00000487023 394 ntBASIC5.64□□□□□ -1.51
VCLP18206 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 IGLVIV-64-201ENST00000518581 301 ntBASIC5.64□□□□□ -1.51
VCLP18206 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.64□□□□□ -1.51
VCLP18206 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.64□□□□□ -1.51
VCLP18206 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.64□□□□□ -1.51
VCLP18206 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.64□□□□□ -1.51
VCLP18206 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.64□□□□□ -1.51
VCLP18206 MIR3614-201ENST00000581261 86 ntBASIC5.64□□□□□ -1.51
VCLP18206 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.64□□□□□ -1.51
VCLP18206 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.64□□□□□ -1.51
VCLP18206 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.64□□□□□ -1.51
VCLP18206 AC126175.1-201ENST00000617041 758 ntBASIC5.64□□□□□ -1.51
VCLP18206 MIR6133-201ENST00000617057 108 ntBASIC5.64□□□□□ -1.51
VCLP18206 AC103703.1-201ENST00000634783 663 ntBASIC5.64□□□□□ -1.51
VCLP18206 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.64□□□□□ -1.51
VCLP18206 AC008691.1-209ENST00000642094 814 ntBASIC5.64□□□□□ -1.51
VCLP18206 KARSP1-201ENST00000451871 1752 ntBASIC5.64□□□□□ -1.51
VCLP18206 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.64□□□□□ -1.51
VCLP18206 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.64□□□□□ -1.51
VCLP18206 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
VCLP18206 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VCLP18206 AC026523.2-201ENST00000625039 7739 ntBASIC5.63□□□□□ -1.51
VCLP18206 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
VCLP18206 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 AC019072.1-201ENST00000604535 1551 ntBASIC5.63□□□□□ -1.51
VCLP18206 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 AC003985.2-201ENST00000562268 1669 ntBASIC5.63□□□□□ -1.51
VCLP18206 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCLP18206 RNA5SP46-201ENST00000362370 120 ntBASIC5.63□□□□□ -1.51
VCLP18206 RNA5SP394-201ENST00000364216 119 ntBASIC5.63□□□□□ -1.51
VCLP18206 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.63□□□□□ -1.51
VCLP18206 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.63□□□□□ -1.51
VCLP18206 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.63□□□□□ -1.51
VCLP18206 NIFKP3-201ENST00000417799 865 ntBASIC5.63□□□□□ -1.51
VCLP18206 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.63□□□□□ -1.51
VCLP18206 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.63□□□□□ -1.51
VCLP18206 AC093155.2-201ENST00000420734 937 ntBASIC5.63□□□□□ -1.51
VCLP18206 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VCLP18206 SNRPFP2-201ENST00000440710 251 ntBASIC5.63□□□□□ -1.51
VCLP18206 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.63□□□□□ -1.51
VCLP18206 AL358876.1-201ENST00000453364 1075 ntBASIC5.63□□□□□ -1.51
VCLP18206 YWHAEP1-201ENST00000453697 763 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms