Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
KRT3P12035 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
KRT3P12035 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.76□□□□□ -1.49
KRT3P12035 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.76□□□□□ -1.49
KRT3P12035 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
KRT3P12035 PPIAP9-201ENST00000403866 498 ntBASIC5.76□□□□□ -1.49
KRT3P12035 TNPO1P1-201ENST00000423641 1138 ntBASIC5.76□□□□□ -1.49
KRT3P12035 AC009784.1-201ENST00000426484 460 ntBASIC5.76□□□□□ -1.49
KRT3P12035 TRGV7-201ENST00000427089 353 ntBASIC5.76□□□□□ -1.49
KRT3P12035 HMGN1P36-201ENST00000446623 298 ntBASIC5.76□□□□□ -1.49
KRT3P12035 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.76□□□□□ -1.49
KRT3P12035 HMGB3P14-201ENST00000494195 599 ntBASIC5.76□□□□□ -1.49
KRT3P12035 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.76□□□□□ -1.49
KRT3P12035 AC074087.1-201ENST00000512059 724 ntBASIC5.76□□□□□ -1.49
KRT3P12035 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.76□□□□□ -1.49
KRT3P12035 AC090888.3-201ENST00000558917 509 ntBASIC5.76□□□□□ -1.49
KRT3P12035 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.76□□□□□ -1.49
KRT3P12035 AC010487.1-201ENST00000594408 1172 ntBASIC5.76□□□□□ -1.49
KRT3P12035 AC015982.1-201ENST00000608113 465 ntBASIC5.76□□□□□ -1.49
KRT3P12035 AL118522.2-201ENST00000616045 615 ntBASIC5.76□□□□□ -1.49
KRT3P12035 AC127024.6-201ENST00000621598 424 ntBASIC5.76□□□□□ -1.49
KRT3P12035 AC132068.1-201ENST00000623805 459 ntBASIC5.76□□□□□ -1.49
KRT3P12035 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.76□□□□□ -1.49
KRT3P12035 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRT3P12035 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.76□□□□□ -1.49
KRT3P12035 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
KRT3P12035 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
KRT3P12035 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
KRT3P12035 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
KRT3P12035 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
KRT3P12035 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
KRT3P12035 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 RN7SKP81-201ENST00000365603 331 ntBASIC5.75□□□□□ -1.49
KRT3P12035 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 OOSP1-201ENST00000398992 1270 ntBASIC5.75□□□□□ -1.49
KRT3P12035 AL035696.2-201ENST00000407941 709 ntBASIC5.75□□□□□ -1.49
KRT3P12035 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.75□□□□□ -1.49
KRT3P12035 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.75□□□□□ -1.49
KRT3P12035 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.75□□□□□ -1.49
KRT3P12035 AC002069.1-201ENST00000429649 1159 ntBASIC5.75□□□□□ -1.49
KRT3P12035 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 DEFB109A-201ENST00000482450 265 ntBASIC5.75□□□□□ -1.49
KRT3P12035 AC113398.2-201ENST00000507630 558 ntBASIC5.75□□□□□ -1.49
KRT3P12035 SNORD116-30-201ENST00000516468 85 ntBASIC5.75□□□□□ -1.49
KRT3P12035 SEPT10P1-201ENST00000517342 1162 ntBASIC5.75□□□□□ -1.49
KRT3P12035 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.75□□□□□ -1.49
KRT3P12035 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.75□□□□□ -1.49
KRT3P12035 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
KRT3P12035 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.75□□□□□ -1.49
KRT3P12035 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 MIR7853-201ENST00000584820 132 ntBASIC5.75□□□□□ -1.49
KRT3P12035 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.75□□□□□ -1.49
KRT3P12035 AC008521.2-201ENST00000591021 259 ntBASIC5.75□□□□□ -1.49
KRT3P12035 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.75□□□□□ -1.49
KRT3P12035 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 OR8G7P-201ENST00000616658 848 ntBASIC5.75□□□□□ -1.49
KRT3P12035 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 AC073869.7-201ENST00000640874 297 ntBASIC5.75□□□□□ -1.49
KRT3P12035 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
KRT3P12035 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.75□□□□□ -1.49
KRT3P12035 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRT3P12035 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
KRT3P12035 AC068870.3-201ENST00000625077 2536 ntBASIC5.75□□□□□ -1.49
KRT3P12035 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
KRT3P12035 DDX18P6-201ENST00000450119 1997 ntBASIC5.75□□□□□ -1.49
KRT3P12035 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
KRT3P12035 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
KRT3P12035 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.74□□□□□ -1.49
KRT3P12035 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRT3P12035 AC100757.1-201ENST00000616872 1835 ntBASIC5.74□□□□□ -1.49
KRT3P12035 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
KRT3P12035 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms