Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RPL7L1P9-201ENST00000431298 745 ntBASIC6.4□□□□□ -1.38
TOP1P11387 CYCSP6-201ENST00000434498 302 ntBASIC6.4□□□□□ -1.38
TOP1P11387 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.4□□□□□ -1.38
TOP1P11387 IGBP1P3-201ENST00000447449 1000 ntBASIC6.4□□□□□ -1.38
TOP1P11387 RN7SL188P-201ENST00000469842 285 ntBASIC6.4□□□□□ -1.38
TOP1P11387 OR2AO1P-201ENST00000476497 403 ntBASIC6.4□□□□□ -1.38
TOP1P11387 RPS4XP14-201ENST00000493072 781 ntBASIC6.4□□□□□ -1.38
TOP1P11387 MTND6P2-201ENST00000512226 524 ntBASIC6.4□□□□□ -1.38
TOP1P11387 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.4□□□□□ -1.38
TOP1P11387 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.4□□□□□ -1.38
TOP1P11387 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.4□□□□□ -1.38
TOP1P11387 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TOP1P11387 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.4□□□□□ -1.38
TOP1P11387 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.4□□□□□ -1.38
TOP1P11387 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.4□□□□□ -1.38
TOP1P11387 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.4□□□□□ -1.38
TOP1P11387 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.4□□□□□ -1.38
TOP1P11387 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TOP1P11387 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.4□□□□□ -1.38
TOP1P11387 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
TOP1P11387 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.4□□□□□ -1.39
TOP1P11387 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.4□□□□□ -1.39
TOP1P11387 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TOP1P11387 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TOP1P11387 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TOP1P11387 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.4□□□□□ -1.39
TOP1P11387 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
TOP1P11387 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
TOP1P11387 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOP1P11387 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOP1P11387 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOP1P11387 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.39□□□□□ -1.39
TOP1P11387 AL022311.1-201ENST00000623726 19416 ntBASIC6.39□□□□□ -1.39
TOP1P11387 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TOP1P11387 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TOP1P11387 RN7SKP145-201ENST00000363291 303 ntBASIC6.39□□□□□ -1.39
TOP1P11387 U3.23-201ENST00000391132 200 ntBASIC6.39□□□□□ -1.39
TOP1P11387 MIR1286-201ENST00000408112 78 ntBASIC6.39□□□□□ -1.39
TOP1P11387 RPL35AP24-201ENST00000413846 330 ntBASIC6.39□□□□□ -1.39
TOP1P11387 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.39□□□□□ -1.39
TOP1P11387 AL355433.1-201ENST00000422804 300 ntBASIC6.39□□□□□ -1.39
TOP1P11387 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.39□□□□□ -1.39
TOP1P11387 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.39□□□□□ -1.39
TOP1P11387 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.39□□□□□ -1.39
TOP1P11387 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.39□□□□□ -1.39
TOP1P11387 LINC02210-201ENST00000444561 288 ntBASIC6.39□□□□□ -1.39
TOP1P11387 RPS26P41-201ENST00000450370 284 ntBASIC6.39□□□□□ -1.39
TOP1P11387 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TOP1P11387 RN7SL214P-201ENST00000487317 265 ntBASIC6.39□□□□□ -1.39
TOP1P11387 RN7SL447P-201ENST00000494711 245 ntBASIC6.39□□□□□ -1.39
TOP1P11387 AC105420.1-201ENST00000504389 582 ntBASIC6.39□□□□□ -1.39
TOP1P11387 HMGB1P44-201ENST00000508597 572 ntBASIC6.39□□□□□ -1.39
TOP1P11387 SCARNA16.4-201ENST00000516956 187 ntBASIC6.39□□□□□ -1.39
TOP1P11387 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.39□□□□□ -1.39
TOP1P11387 AC060766.1-201ENST00000590824 627 ntBASIC6.39□□□□□ -1.39
TOP1P11387 WBP1LP8-201ENST00000617401 327 ntBASIC6.39□□□□□ -1.39
TOP1P11387 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.39□□□□□ -1.39
TOP1P11387 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TOP1P11387 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.39□□□□□ -1.39
TOP1P11387 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.39□□□□□ -1.39
TOP1P11387 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TOP1P11387 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TOP1P11387 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.39□□□□□ -1.39
TOP1P11387 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
TOP1P11387 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.39□□□□□ -1.39
TOP1P11387 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
TOP1P11387 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TOP1P11387 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
TOP1P11387 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TOP1P11387 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TOP1P11387 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TOP1P11387 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TOP1P11387 SNORA5.1-201ENST00000384275 131 ntBASIC6.38□□□□□ -1.39
TOP1P11387 AL133388.1-201ENST00000404509 287 ntBASIC6.38□□□□□ -1.39
TOP1P11387 AL133325.1-201ENST00000421090 382 ntBASIC6.38□□□□□ -1.39
TOP1P11387 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.38□□□□□ -1.39
TOP1P11387 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.38□□□□□ -1.39
TOP1P11387 AL672138.1-201ENST00000450604 1015 ntBASIC6.38□□□□□ -1.39
TOP1P11387 AL606490.1-201ENST00000452266 765 ntBASIC6.38□□□□□ -1.39
TOP1P11387 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP1P11387 RPL7P39-201ENST00000481157 744 ntBASIC6.38□□□□□ -1.39
TOP1P11387 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP1P11387 RPEP1-201ENST00000504507 658 ntBASIC6.38□□□□□ -1.39
TOP1P11387 AC024558.1-201ENST00000505008 528 ntBASIC6.38□□□□□ -1.39
TOP1P11387 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP1P11387 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.38□□□□□ -1.39
TOP1P11387 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.38□□□□□ -1.39
TOP1P11387 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP1P11387 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP1P11387 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.38□□□□□ -1.39
TOP1P11387 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP1P11387 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.38□□□□□ -1.39
TOP1P11387 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP1P11387 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.38□□□□□ -1.39
TOP1P11387 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TOP1P11387 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP1P11387 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.38□□□□□ -1.39
TOP1P11387 MIR6133-201ENST00000617057 108 ntBASIC6.38□□□□□ -1.39
TOP1P11387 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.38□□□□□ -1.39
TOP1P11387 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms