Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.91□□□□□ -1.46
VTNP04004 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VTNP04004 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
VTNP04004 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VTNP04004 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.9□□□□□ -1.46
VTNP04004 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VTNP04004 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VTNP04004 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VTNP04004 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VTNP04004 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.9□□□□□ -1.46
VTNP04004 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
VTNP04004 SNORD56.6-201ENST00000384569 71 ntBASIC5.9□□□□□ -1.46
VTNP04004 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.9□□□□□ -1.46
VTNP04004 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.9□□□□□ -1.46
VTNP04004 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.9□□□□□ -1.46
VTNP04004 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.9□□□□□ -1.46
VTNP04004 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.9□□□□□ -1.46
VTNP04004 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.9□□□□□ -1.46
VTNP04004 AC058823.1-201ENST00000485315 474 ntBASIC5.9□□□□□ -1.46
VTNP04004 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.9□□□□□ -1.46
VTNP04004 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.9□□□□□ -1.46
VTNP04004 AC021106.1-201ENST00000509020 1058 ntBASIC5.9□□□□□ -1.46
VTNP04004 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
VTNP04004 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.9□□□□□ -1.46
VTNP04004 YWHABP2-201ENST00000540201 713 ntBASIC5.9□□□□□ -1.46
VTNP04004 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.9□□□□□ -1.46
VTNP04004 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.9□□□□□ -1.46
VTNP04004 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.9□□□□□ -1.46
VTNP04004 RN7SL708P-201ENST00000580952 299 ntBASIC5.9□□□□□ -1.46
VTNP04004 AC008536.1-201ENST00000602872 669 ntBASIC5.9□□□□□ -1.46
VTNP04004 AC009237.13-201ENST00000603193 276 ntBASIC5.9□□□□□ -1.46
VTNP04004 AC087763.1-201ENST00000603391 286 ntBASIC5.9□□□□□ -1.46
VTNP04004 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.9□□□□□ -1.46
VTNP04004 AC024940.4-201ENST00000605507 246 ntBASIC5.9□□□□□ -1.46
VTNP04004 AL352984.2-202ENST00000613699 155 ntBASIC5.9□□□□□ -1.46
VTNP04004 AC090527.3-201ENST00000619041 548 ntBASIC5.9□□□□□ -1.46
VTNP04004 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
VTNP04004 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VTNP04004 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.9□□□□□ -1.47
VTNP04004 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
VTNP04004 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VTNP04004 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
VTNP04004 OR4G1P-202ENST00000641173 1788 ntBASIC5.9□□□□□ -1.47
VTNP04004 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VTNP04004 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VTNP04004 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.9□□□□□ -1.47
VTNP04004 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.9□□□□□ -1.47
VTNP04004 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VTNP04004 AC138907.8-201ENST00000623981 2256 ntBASIC5.9□□□□□ -1.47
VTNP04004 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
VTNP04004 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.89□□□□□ -1.47
VTNP04004 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
VTNP04004 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.89□□□□□ -1.47
VTNP04004 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.89□□□□□ -1.47
VTNP04004 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VTNP04004 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 BCORP1-203ENST00000513194 5093 ntBASIC5.89□□□□□ -1.47
VTNP04004 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
VTNP04004 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VTNP04004 DBIP1-201ENST00000401435 260 ntBASIC5.89□□□□□ -1.47
VTNP04004 HSPA8P15-201ENST00000401676 786 ntBASIC5.89□□□□□ -1.47
VTNP04004 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.89□□□□□ -1.47
VTNP04004 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.89□□□□□ -1.47
VTNP04004 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.89□□□□□ -1.47
VTNP04004 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.89□□□□□ -1.47
VTNP04004 RPL12P3-201ENST00000440080 396 ntBASIC5.89□□□□□ -1.47
VTNP04004 LINC02210-201ENST00000444561 288 ntBASIC5.89□□□□□ -1.47
VTNP04004 RPS23P9-201ENST00000448848 438 ntBASIC5.89□□□□□ -1.47
VTNP04004 AC009127.1-201ENST00000467090 155 ntBASIC5.89□□□□□ -1.47
VTNP04004 CBX1P5-201ENST00000475330 559 ntBASIC5.89□□□□□ -1.47
VTNP04004 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.89□□□□□ -1.47
VTNP04004 RPS4XP20-201ENST00000505751 772 ntBASIC5.89□□□□□ -1.47
VTNP04004 AP003080.1-202ENST00000526526 915 ntBASIC5.89□□□□□ -1.47
VTNP04004 AC084824.2-201ENST00000548906 345 ntBASIC5.89□□□□□ -1.47
VTNP04004 AC006116.3-201ENST00000592968 361 ntBASIC5.89□□□□□ -1.47
VTNP04004 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.89□□□□□ -1.47
VTNP04004 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.89□□□□□ -1.47
VTNP04004 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.89□□□□□ -1.47
VTNP04004 AC068870.2-201ENST00000620635 389 ntBASIC5.89□□□□□ -1.47
VTNP04004 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VTNP04004 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
VTNP04004 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
VTNP04004 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
VTNP04004 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VTNP04004 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTNP04004 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.88□□□□□ -1.47
VTNP04004 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VTNP04004 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VTNP04004 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VTNP04004 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms