Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.26□□□□□ -1.57
TNFP01375 RPL34P27-201ENST00000428810 349 ntBASIC5.26□□□□□ -1.57
TNFP01375 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 AC073465.2-201ENST00000440938 498 ntBASIC5.26□□□□□ -1.57
TNFP01375 PPP1R11P1-201ENST00000486095 376 ntBASIC5.26□□□□□ -1.57
TNFP01375 RN7SL423P-201ENST00000486202 304 ntBASIC5.26□□□□□ -1.57
TNFP01375 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFP01375 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFP01375 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFP01375 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFP01375 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFP01375 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.26□□□□□ -1.57
TNFP01375 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.26□□□□□ -1.57
TNFP01375 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 RN7SL356P-201ENST00000582228 248 ntBASIC5.26□□□□□ -1.57
TNFP01375 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFP01375 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TNFP01375 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFP01375 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.26□□□□□ -1.57
TNFP01375 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TNFP01375 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TNFP01375 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFP01375 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFP01375 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TNFP01375 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TNFP01375 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TNFP01375 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFP01375 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TNFP01375 SNORA17.1-201ENST00000362945 126 ntBASIC5.25□□□□□ -1.57
TNFP01375 RNU6-316P-201ENST00000391027 107 ntBASIC5.25□□□□□ -1.57
TNFP01375 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFP01375 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.25□□□□□ -1.57
TNFP01375 AC006455.6-201ENST00000426192 893 ntBASIC5.25□□□□□ -1.57
TNFP01375 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.25□□□□□ -1.57
TNFP01375 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFP01375 RN7SL329P-201ENST00000467740 299 ntBASIC5.25□□□□□ -1.57
TNFP01375 RPL7AP6-201ENST00000477943 801 ntBASIC5.25□□□□□ -1.57
TNFP01375 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFP01375 NDUFA5P12-201ENST00000503796 343 ntBASIC5.25□□□□□ -1.57
TNFP01375 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFP01375 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 RN7SKP66-201ENST00000516681 231 ntBASIC5.25□□□□□ -1.57
TNFP01375 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.25□□□□□ -1.57
TNFP01375 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.25□□□□□ -1.57
TNFP01375 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.25□□□□□ -1.57
TNFP01375 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFP01375 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFP01375 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFP01375 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFP01375 AC127381.1-201ENST00000555979 939 ntBASIC5.25□□□□□ -1.57
TNFP01375 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFP01375 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFP01375 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFP01375 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFP01375 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFP01375 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFP01375 AP000769.2-201ENST00000602344 396 ntBASIC5.25□□□□□ -1.57
TNFP01375 AL445222.1-201ENST00000607259 628 ntBASIC5.25□□□□□ -1.57
TNFP01375 AC090527.3-201ENST00000619041 548 ntBASIC5.25□□□□□ -1.57
TNFP01375 AC020763.5-201ENST00000623298 430 ntBASIC5.25□□□□□ -1.57
TNFP01375 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFP01375 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TNFP01375 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TNFP01375 AC079097.1-201ENST00000512187 1399 ntBASIC5.25□□□□□ -1.57
TNFP01375 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TNFP01375 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TNFP01375 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFP01375 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.25□□□□□ -1.57
TNFP01375 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFP01375 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TNFP01375 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFP01375 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.24□□□□□ -1.57
TNFP01375 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TNFP01375 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFP01375 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFP01375 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TNFP01375 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFP01375 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFP01375 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFP01375 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFP01375 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TNFP01375 U3.28-201ENST00000391249 210 ntBASIC5.24□□□□□ -1.57
TNFP01375 U3.36-201ENST00000408418 213 ntBASIC5.24□□□□□ -1.57
TNFP01375 RN7SKP17-201ENST00000411242 351 ntBASIC5.24□□□□□ -1.57
TNFP01375 AC211486.3-201ENST00000412694 621 ntBASIC5.24□□□□□ -1.57
TNFP01375 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFP01375 Z92846.1-201ENST00000456203 268 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms