Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC137627.1-201ENST00000545761 289 ntBASIC5.85□□□□□ -1.47
TIMP1P01033 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.85□□□□□ -1.47
TIMP1P01033 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.85□□□□□ -1.47
TIMP1P01033 AC012414.7-202ENST00000622705 1090 ntBASIC5.85□□□□□ -1.47
TIMP1P01033 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TIMP1P01033 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.85□□□□□ -1.47
TIMP1P01033 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
TIMP1P01033 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.85□□□□□ -1.47
TIMP1P01033 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.85□□□□□ -1.47
TIMP1P01033 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TIMP1P01033 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TIMP1P01033 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.85□□□□□ -1.47
TIMP1P01033 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TIMP1P01033 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TIMP1P01033 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TIMP1P01033 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TIMP1P01033 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.85□□□□□ -1.47
TIMP1P01033 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
TIMP1P01033 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.84□□□□□ -1.47
TIMP1P01033 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
TIMP1P01033 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TIMP1P01033 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TIMP1P01033 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TIMP1P01033 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.84□□□□□ -1.47
TIMP1P01033 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TIMP1P01033 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.84□□□□□ -1.47
TIMP1P01033 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TIMP1P01033 MFSD8-216ENST00000641147 4009 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TIMP1P01033 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
TIMP1P01033 RNU6-398P-201ENST00000384143 109 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TIMP1P01033 GAPDHP15-201ENST00000398586 975 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 NPM1P40-201ENST00000412758 733 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 RPSAP35-201ENST00000413753 818 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 HSPE1P27-201ENST00000430808 296 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 AC016712.1-201ENST00000431088 378 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 TPT1P12-201ENST00000448968 492 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 RSU1P1-201ENST00000453416 441 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 AC009963.2-201ENST00000453431 138 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 AC092905.1-201ENST00000467527 949 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 AC109464.1-201ENST00000511091 819 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 snoU109.5-201ENST00000516231 132 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.84□□□□□ -1.47
TIMP1P01033 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.84□□□□□ -1.47
TIMP1P01033 MIR4301-201ENST00000577203 66 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 MIR4270-201ENST00000581799 70 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 AC209154.1-201ENST00000582156 337 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.84□□□□□ -1.47
TIMP1P01033 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.84□□□□□ -1.47
TIMP1P01033 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.84□□□□□ -1.47
TIMP1P01033 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.84□□□□□ -1.47
TIMP1P01033 AC079414.3-201ENST00000612986 1090 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.84□□□□□ -1.47
TIMP1P01033 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TIMP1P01033 IRF5P1-201ENST00000504852 2164 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 AP000641.1-201ENST00000531988 1639 ntBASIC5.84□□□□□ -1.47
TIMP1P01033 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TIMP1P01033 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TIMP1P01033 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TIMP1P01033 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TIMP1P01033 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TIMP1P01033 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TIMP1P01033 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TIMP1P01033 AC132825.1-201ENST00000463573 2247 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 AL731532.1-201ENST00000623972 4236 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 AC068870.1-201ENST00000563737 2455 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
TIMP1P01033 AL121886.1-201ENST00000358609 435 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 RN7SKP95-201ENST00000362860 303 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 RNA5SP455-201ENST00000365190 119 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 RPL11P3-201ENST00000395256 523 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 NUDT19P3-201ENST00000404698 555 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TIMP1P01033 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.83□□□□□ -1.48
TIMP1P01033 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.83□□□□□ -1.48
TIMP1P01033 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.83□□□□□ -1.48
TIMP1P01033 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.83□□□□□ -1.48
TIMP1P01033 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.83□□□□□ -1.48
TIMP1P01033 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.83□□□□□ -1.48
TIMP1P01033 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.83□□□□□ -1.48
TIMP1P01033 AC104634.1-201ENST00000452720 462 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.83□□□□□ -1.48
TIMP1P01033 NDUFA12P1-201ENST00000455914 406 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 AC092754.1-201ENST00000472975 479 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.83□□□□□ -1.48
TIMP1P01033 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TIMP1P01033 HPRT1P1-201ENST00000509498 657 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 OR7H2P-201ENST00000513483 306 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 AC021006.3-201ENST00000530771 192 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 OR5AN2P-201ENST00000534535 896 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 AC009117.1-201ENST00000563948 554 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 MIR4737-201ENST00000583979 81 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 AL031320.1-201ENST00000604177 357 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 AL356752.1-201ENST00000615844 593 ntBASIC5.83□□□□□ -1.48
TIMP1P01033 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms