Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 NPM1P10-201ENST00000398310 865 ntBASIC6.62□□□□□ -1.35
MBD4O95243 RPL35AP24-201ENST00000413846 330 ntBASIC6.62□□□□□ -1.35
MBD4O95243 OR10T1P-201ENST00000424327 947 ntBASIC6.62□□□□□ -1.35
MBD4O95243 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.62□□□□□ -1.35
MBD4O95243 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.62□□□□□ -1.35
MBD4O95243 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.62□□□□□ -1.35
MBD4O95243 SPRYD7P1-201ENST00000443861 570 ntBASIC6.62□□□□□ -1.35
MBD4O95243 AC011225.1-201ENST00000457751 369 ntBASIC6.62□□□□□ -1.35
MBD4O95243 AC022336.1-201ENST00000475510 337 ntBASIC6.62□□□□□ -1.35
MBD4O95243 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 SCARNA21.2-201ENST00000516600 166 ntBASIC6.62□□□□□ -1.35
MBD4O95243 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.62□□□□□ -1.35
MBD4O95243 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 OR5AM1P-201ENST00000532136 1032 ntBASIC6.62□□□□□ -1.35
MBD4O95243 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.62□□□□□ -1.35
MBD4O95243 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.62□□□□□ -1.35
MBD4O95243 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.62□□□□□ -1.35
MBD4O95243 AC027281.1-201ENST00000574178 758 ntBASIC6.62□□□□□ -1.35
MBD4O95243 MIR4420-201ENST00000583944 77 ntBASIC6.62□□□□□ -1.35
MBD4O95243 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.62□□□□□ -1.35
MBD4O95243 AC000068.2-201ENST00000608816 460 ntBASIC6.62□□□□□ -1.35
MBD4O95243 OR4F13P-202ENST00000560066 2054 ntBASIC6.62□□□□□ -1.35
MBD4O95243 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.62□□□□□ -1.35
MBD4O95243 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MBD4O95243 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.62□□□□□ -1.35
MBD4O95243 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.62□□□□□ -1.35
MBD4O95243 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.62□□□□□ -1.35
MBD4O95243 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.61□□□□□ -1.35
MBD4O95243 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
MBD4O95243 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.61□□□□□ -1.35
MBD4O95243 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
MBD4O95243 CIR1P2-201ENST00000514821 1342 ntBASIC6.61□□□□□ -1.35
MBD4O95243 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
MBD4O95243 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.61□□□□□ -1.35
MBD4O95243 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.61□□□□□ -1.35
MBD4O95243 RNU1-77P-201ENST00000390868 162 ntBASIC6.61□□□□□ -1.35
MBD4O95243 AC005522.1-201ENST00000395416 346 ntBASIC6.61□□□□□ -1.35
MBD4O95243 AL607077.1-201ENST00000401718 499 ntBASIC6.61□□□□□ -1.35
MBD4O95243 GTF3AP1-201ENST00000416942 1004 ntBASIC6.61□□□□□ -1.35
MBD4O95243 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.61□□□□□ -1.35
MBD4O95243 CYCSP12-201ENST00000437729 300 ntBASIC6.61□□□□□ -1.35
MBD4O95243 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.61□□□□□ -1.35
MBD4O95243 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.61□□□□□ -1.35
MBD4O95243 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.61□□□□□ -1.35
MBD4O95243 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.61□□□□□ -1.35
MBD4O95243 AC122688.1-201ENST00000541494 223 ntBASIC6.61□□□□□ -1.35
MBD4O95243 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.61□□□□□ -1.35
MBD4O95243 AC067805.1-201ENST00000559344 470 ntBASIC6.61□□□□□ -1.35
MBD4O95243 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 AP005403.1-201ENST00000579720 229 ntBASIC6.61□□□□□ -1.35
MBD4O95243 MIR4433B-201ENST00000581329 102 ntBASIC6.61□□□□□ -1.35
MBD4O95243 FKBP1AP1-201ENST00000594588 318 ntBASIC6.61□□□□□ -1.35
MBD4O95243 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.61□□□□□ -1.35
MBD4O95243 AC125494.2-201ENST00000602431 657 ntBASIC6.61□□□□□ -1.35
MBD4O95243 AC008833.1-201ENST00000611633 691 ntBASIC6.61□□□□□ -1.35
MBD4O95243 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.61□□□□□ -1.35
MBD4O95243 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.61□□□□□ -1.35
MBD4O95243 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.61□□□□□ -1.35
MBD4O95243 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
MBD4O95243 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
MBD4O95243 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
MBD4O95243 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
MBD4O95243 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MBD4O95243 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
MBD4O95243 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.6□□□□□ -1.35
MBD4O95243 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MBD4O95243 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
MBD4O95243 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MBD4O95243 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
MBD4O95243 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MBD4O95243 AC083799.1-201ENST00000366451 910 ntBASIC6.6□□□□□ -1.35
MBD4O95243 MIR7-1-201ENST00000384871 110 ntBASIC6.6□□□□□ -1.35
MBD4O95243 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.6□□□□□ -1.35
MBD4O95243 TRIM60P17-201ENST00000415181 719 ntBASIC6.6□□□□□ -1.35
MBD4O95243 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
MBD4O95243 AC007064.3-201ENST00000422608 359 ntBASIC6.6□□□□□ -1.35
MBD4O95243 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.6□□□□□ -1.35
MBD4O95243 snoU13.29-201ENST00000459370 104 ntBASIC6.6□□□□□ -1.35
MBD4O95243 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.6□□□□□ -1.35
MBD4O95243 SNRPCP3-201ENST00000474888 476 ntBASIC6.6□□□□□ -1.35
MBD4O95243 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.6□□□□□ -1.35
MBD4O95243 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.6□□□□□ -1.35
MBD4O95243 RNU6-319P-201ENST00000516025 108 ntBASIC6.6□□□□□ -1.35
MBD4O95243 AP002981.1-201ENST00000517692 975 ntBASIC6.6□□□□□ -1.35
MBD4O95243 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.6□□□□□ -1.35
MBD4O95243 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.6□□□□□ -1.35
MBD4O95243 AP001804.2-201ENST00000533932 910 ntBASIC6.6□□□□□ -1.35
MBD4O95243 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.6□□□□□ -1.35
MBD4O95243 AC090022.1-201ENST00000546569 311 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms