Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6□□□□□ -1.45
VPS4BO75351 AC018645.1-201ENST00000505003 109 ntBASIC6□□□□□ -1.45
VPS4BO75351 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6□□□□□ -1.45
VPS4BO75351 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6□□□□□ -1.45
VPS4BO75351 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6□□□□□ -1.45
VPS4BO75351 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6□□□□□ -1.45
VPS4BO75351 AL132657.2-201ENST00000564417 358 ntBASIC6□□□□□ -1.45
VPS4BO75351 CBX3P2-202ENST00000583365 535 ntBASIC6□□□□□ -1.45
VPS4BO75351 MIR132-201ENST00000591554 101 ntBASIC6□□□□□ -1.45
VPS4BO75351 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6□□□□□ -1.45
VPS4BO75351 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6□□□□□ -1.45
VPS4BO75351 AC108865.2-201ENST00000606881 432 ntBASIC6□□□□□ -1.45
VPS4BO75351 MIR6768-201ENST00000610734 72 ntBASIC6□□□□□ -1.45
VPS4BO75351 SNORA17.5-201ENST00000630429 132 ntBASIC6□□□□□ -1.45
VPS4BO75351 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6□□□□□ -1.45
VPS4BO75351 MTND2P41-201ENST00000637599 773 ntBASIC6□□□□□ -1.45
VPS4BO75351 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6□□□□□ -1.45
VPS4BO75351 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS4BO75351 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6□□□□□ -1.45
VPS4BO75351 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6□□□□□ -1.45
VPS4BO75351 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6□□□□□ -1.45
VPS4BO75351 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS4BO75351 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS4BO75351 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS4BO75351 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC022164.1-201ENST00000568767 2673 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 RNU5B-4P-201ENST00000363508 111 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS4BO75351 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS4BO75351 RNU6-796P-201ENST00000391086 107 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AL592310.1-201ENST00000414330 671 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS4BO75351 BTF3P9-201ENST00000418784 283 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 AL035246.1-201ENST00000433554 1255 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 MTCO2P20-201ENST00000437339 673 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 MTCYBP21-201ENST00000443300 1113 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC010240.2-201ENST00000445363 1205 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 NXT1P1-201ENST00000458481 316 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC073594.1-201ENST00000462065 364 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC128716.1-201ENST00000475129 166 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 RPL21P47-201ENST00000483696 477 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC090058.1-201ENST00000498788 435 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC027308.1-201ENST00000517993 110 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 IGKV2-19-201ENST00000518132 283 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC027369.2-201ENST00000528030 440 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AP000916.1-201ENST00000533869 835 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC023538.1-201ENST00000534576 736 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 AC051619.2-201ENST00000559063 397 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC106734.1-201ENST00000568646 663 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AP000919.1-202ENST00000581139 1264 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS4BO75351 AL160237.3-201ENST00000604114 1013 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC073137.1-201ENST00000605636 634 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC093388.1-201ENST00000609166 430 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC129778.1-202ENST00000623812 261 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
VPS4BO75351 AL591379.1-207ENST00000635982 261 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS4BO75351 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS4BO75351 AL137141.1-201ENST00000624622 4836 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS4BO75351 MTND5P11-201ENST00000511037 1812 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 ICE2P1-201ENST00000512800 1849 ntBASIC5.99□□□□□ -1.45
VPS4BO75351 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS4BO75351 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS4BO75351 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms