Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL592429.1-201ENST00000403909 1473 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.74□□□□□ -1.49
SMAD6O43541 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 MTCO1P11-201ENST00000429111 1528 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 AC092111.2-201ENST00000611627 1414 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AL136520.1-201ENST00000600311 1322 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SMAD6O43541 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.73□□□□□ -1.49
SMAD6O43541 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 RN7SKP124-201ENST00000364730 341 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 MIR620-201ENST00000385232 95 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 AC007068.1-201ENST00000396690 844 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 RN7SKP229-201ENST00000410465 302 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 AC013268.2-201ENST00000420753 337 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.73□□□□□ -1.49
SMAD6O43541 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.73□□□□□ -1.49
SMAD6O43541 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 AL450023.1-201ENST00000450868 751 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 snoU13.29-201ENST00000459370 104 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.73□□□□□ -1.49
SMAD6O43541 AGGF1P3-201ENST00000493675 1213 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.73□□□□□ -1.49
SMAD6O43541 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.73□□□□□ -1.49
SMAD6O43541 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SMAD6O43541 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.73□□□□□ -1.49
SMAD6O43541 AC139697.1-201ENST00000548429 745 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 MRPS21P7-201ENST00000566937 238 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 DHFRP1-201ENST00000579682 559 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 AC245884.10-201ENST00000597355 337 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 AP001267.4-201ENST00000602598 545 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 HIRAP1-201ENST00000605318 787 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.73□□□□□ -1.49
SMAD6O43541 Z95327.3-201ENST00000610385 572 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 MIR6768-201ENST00000610734 72 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 AC104763.3-201ENST00000613765 618 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SMAD6O43541 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SMAD6O43541 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SMAD6O43541 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.73□□□□□ -1.49
SMAD6O43541 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.73□□□□□ -1.49
SMAD6O43541 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMAD6O43541 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SMAD6O43541 MTND4P9-201ENST00000507819 1346 ntBASIC5.73□□□□□ -1.49
SMAD6O43541 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 GAPDHP24-201ENST00000328713 983 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 GCNT6-201ENST00000379591 934 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMAD6O43541 AL391422.1-201ENST00000402155 436 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 RSL24D1P1-201ENST00000404972 493 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 GABARAPL3-201ENST00000412799 354 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.72□□□□□ -1.49
SMAD6O43541 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.72□□□□□ -1.49
SMAD6O43541 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.72□□□□□ -1.49
SMAD6O43541 XKRYP6-201ENST00000440468 1116 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 AC114878.1-201ENST00000441166 358 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 XKRYP3-201ENST00000442113 1116 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 AC019185.1-201ENST00000442718 389 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 MEMO1P4-201ENST00000453590 386 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 LDHBP2-201ENST00000456969 1005 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.72□□□□□ -1.49
SMAD6O43541 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.72□□□□□ -1.49
SMAD6O43541 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.72□□□□□ -1.49
SMAD6O43541 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.72□□□□□ -1.49
SMAD6O43541 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.72□□□□□ -1.49
SMAD6O43541 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.72□□□□□ -1.49
SMAD6O43541 AC008628.1-201ENST00000508663 265 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 RPL7L1P4-201ENST00000513004 707 ntBASIC5.72□□□□□ -1.49
SMAD6O43541 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.72□□□□□ -1.49
SMAD6O43541 AC020937.1-201ENST00000519677 1013 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms