Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SDCBPO00560 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SDCBPO00560 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SDCBPO00560 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SDCBPO00560 RNA5SP510-201ENST00000364697 99 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 RN7SKP6-201ENST00000364795 319 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SDCBPO00560 MIR621-201ENST00000384919 96 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 SNORA48.4-201ENST00000391089 134 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 COX5BP7-201ENST00000414780 274 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 REREP1Y-201ENST00000422655 198 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AL133173.1-201ENST00000423458 397 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AL662874.1-201ENST00000426065 230 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.54□□□□□ -1.68
SDCBPO00560 Z84478.1-201ENST00000438230 1219 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 REREP2Y-201ENST00000439103 200 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.54□□□□□ -1.68
SDCBPO00560 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 EEF1B2P6-201ENST00000445713 673 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AL450023.1-201ENST00000450868 751 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 AC093827.1-201ENST00000480094 861 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.54□□□□□ -1.68
SDCBPO00560 RPS12P31-201ENST00000491419 398 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 NIFKP7-201ENST00000503365 834 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AC109464.1-201ENST00000511091 819 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 RN7SKP99-201ENST00000517028 307 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AC100784.1-201ENST00000522790 310 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SDCBPO00560 NANOGNBP2-201ENST00000544753 553 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AL049872.1-201ENST00000556323 322 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.54□□□□□ -1.68
SDCBPO00560 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.54□□□□□ -1.68
SDCBPO00560 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.54□□□□□ -1.68
SDCBPO00560 AC100767.2-201ENST00000604840 693 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.54□□□□□ -1.68
SDCBPO00560 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.54□□□□□ -1.68
SDCBPO00560 AC008691.1-209ENST00000642094 814 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SDCBPO00560 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SDCBPO00560 AC090220.1-201ENST00000593078 1699 ntBASIC4.54□□□□□ -1.68
SDCBPO00560 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SDCBPO00560 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SDCBPO00560 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.53□□□□□ -1.68
SDCBPO00560 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.53□□□□□ -1.68
SDCBPO00560 LINC01963-201ENST00000562038 3148 ntBASIC4.53□□□□□ -1.68
SDCBPO00560 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.53□□□□□ -1.68
SDCBPO00560 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SDCBPO00560 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SDCBPO00560 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.53□□□□□ -1.68
SDCBPO00560 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.53□□□□□ -1.68
SDCBPO00560 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.53□□□□□ -1.68
SDCBPO00560 IPPKP1-201ENST00000422501 768 ntBASIC4.53□□□□□ -1.68
SDCBPO00560 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 OR6D1P-201ENST00000436165 939 ntBASIC4.53□□□□□ -1.68
SDCBPO00560 NPM1P19-201ENST00000450070 712 ntBASIC4.53□□□□□ -1.68
SDCBPO00560 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 LDHBP2-201ENST00000456969 1005 ntBASIC4.53□□□□□ -1.68
SDCBPO00560 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SDCBPO00560 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.53□□□□□ -1.68
SDCBPO00560 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.53□□□□□ -1.68
SDCBPO00560 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.53□□□□□ -1.68
SDCBPO00560 MIR4433B-201ENST00000581329 102 ntBASIC4.53□□□□□ -1.68
SDCBPO00560 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 AL365181.4-201ENST00000609800 547 ntBASIC4.53□□□□□ -1.68
SDCBPO00560 AC008115.3-201ENST00000614874 549 ntBASIC4.53□□□□□ -1.68
SDCBPO00560 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SDCBPO00560 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.53□□□□□ -1.68
SDCBPO00560 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SDCBPO00560 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SDCBPO00560 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
SDCBPO00560 AC079298.1-201ENST00000625026 1619 ntBASIC4.53□□□□□ -1.68
SDCBPO00560 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SDCBPO00560 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.53□□□□□ -1.68
SDCBPO00560 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SDCBPO00560 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SDCBPO00560 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.52□□□□□ -1.69
SDCBPO00560 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.52□□□□□ -1.69
SDCBPO00560 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SDCBPO00560 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SDCBPO00560 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.52□□□□□ -1.69
SDCBPO00560 RNU1-19P-201ENST00000363306 165 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms