Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 NPM1P42-201ENST00000560329 862 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 DPPA2P4-201ENST00000563717 878 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AL513327.3-201ENST00000602618 469 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AL133481.2-203ENST00000607558 139 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC114786.1-201ENST00000512892 1415 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 UGT2B24P-201ENST00000514441 1597 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 MTND5P23-201ENST00000430812 1655 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC112255.1-201ENST00000624070 2493 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 RN7SKP124-201ENST00000364730 341 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 RNU6-152P-201ENST00000384037 107 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 SEPT7P8-201ENST00000413308 775 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AL596448.1-201ENST00000415024 392 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 VN1R21P-201ENST00000426703 765 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 RSU1P1-201ENST00000453416 441 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC087672.1-201ENST00000479876 766 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AK4P6-201ENST00000505168 528 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC105384.2-201ENST00000508433 640 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC139365.2-201ENST00000517972 253 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC027308.1-201ENST00000517993 110 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 IGLV2-28-201ENST00000520681 304 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 IGKV2-18-201ENST00000522607 343 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 MRPS16P1-201ENST00000523462 412 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 KATNBL1P1-201ENST00000605192 748 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC073111.2-201ENST00000605657 1075 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 OR51C1P-201ENST00000608504 942 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 CU639417.4-201ENST00000623928 207 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC007683.2-201ENST00000624681 714 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 AP001284.1-201ENST00000528393 2118 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 CR788268.1-201ENST00000603931 1809 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 MTCO1P7-201ENST00000419523 1542 ntBASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.18□□□□□ -1.58
NPIPA3F8WFD2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 AL159987.1-201ENST00000347911 293 ntBASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NPIPA3F8WFD2 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms