Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 FRG1BP-201ENST00000278882 761 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 FRG1CP-201ENST00000358464 769 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 Y_RNA.356-201ENST00000365475 113 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 MIR181A1-201ENST00000385026 110 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 RNU11-6P-201ENST00000391127 133 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 RPS7P12-201ENST00000422385 582 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 GAPDHP75-201ENST00000433910 943 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 DNAJC19P4-201ENST00000440115 345 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 TIMM8BP2-201ENST00000445940 251 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AC112198.1-201ENST00000505369 1220 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 B4GALNT2P1-201ENST00000508857 307 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 MIR3135A-201ENST00000578460 77 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 NPM1P45-201ENST00000583151 559 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 AC034229.6-201ENST00000623704 224 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RPL12P13-201ENST00000310055 497 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 Y_RNA.394-201ENST00000383942 103 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RNU6-259P-201ENST00000383999 107 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RNA5SP176-201ENST00000390956 110 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 CIR1P3-201ENST00000405137 479 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RNU2-47P-201ENST00000410649 186 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RNU6-920P-201ENST00000410926 92 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RPL12P9-201ENST00000412942 488 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RPL7AP51-201ENST00000422016 760 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 MTND2P29-201ENST00000438595 412 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 SUMO1P3-201ENST00000439961 304 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC093155.1-201ENST00000440164 826 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC093019.1-201ENST00000443135 252 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 ZNF619P1-201ENST00000446539 752 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 PSPC1P2-201ENST00000455130 225 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RPL31P53-201ENST00000457065 348 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC013828.1-201ENST00000481845 158 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 TPT1P3-201ENST00000492841 512 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 DEFB108A-201ENST00000530110 222 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AL445383.1-201ENST00000554689 874 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC009063.1-201ENST00000563342 702 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC021483.2-201ENST00000567415 758 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC011260.1-201ENST00000578420 472 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 RN7SL126P-201ENST00000616400 299 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 MRPL57P3-201ENST00000619218 176 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 MIR6503-201ENST00000622884 86 ntBASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.93□□□□□ -0.98
PDZRN3Q9UPQ7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms