Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC015720.2-201ENST00000567709 334 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC117490.2-201ENST00000610042 594 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC073592.7-201ENST00000623659 507 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC109780.1-201ENST00000451768 1344 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC005261.6-201ENST00000623072 1387 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC130304.1-201ENST00000622942 2385 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 GAPDHP24-201ENST00000328713 983 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 RNU1-19P-201ENST00000363306 165 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AP000534.2-201ENST00000412729 568 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC019205.1-201ENST00000421830 730 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC007394.1-201ENST00000421941 531 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AL133173.1-201ENST00000423458 397 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 OR6C72P-201ENST00000451403 892 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 RNU7-157P-201ENST00000459600 66 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC089999.1-201ENST00000460336 374 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC100832.1-201ENST00000471945 383 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 OR2A3P-201ENST00000493774 953 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 NRBF2P4-201ENST00000520874 850 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC009268.1-201ENST00000561352 1203 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 RBM22P12-201ENST00000567098 1255 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC060780.2-201ENST00000589047 198 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AP005131.7-201ENST00000610087 611 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC003001.2-201ENST00000616294 831 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AC005840.5-201ENST00000619166 599 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 AL139254.3-201ENST00000641097 674 ntBASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC6Q9UBN7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AC114774.1-201ENST00000507410 1770 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AL590763.1-201ENST00000398297 1545 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AP002512.4-202ENST00000641599 4530 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 MIR1286-201ENST00000408112 78 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 RNU4-34P-201ENST00000410431 124 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 RPL35AP24-201ENST00000413846 330 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AL500527.1-201ENST00000448532 255 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 SBDSP1-204ENST00000453858 737 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 RPL12P39-201ENST00000455456 496 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 RN7SL570P-201ENST00000484405 292 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 OR5M14P-201ENST00000506803 618 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 RN7SKP5-201ENST00000517045 272 ntBASIC6.37□□□□□ -1.39
HDAC6Q9UBN7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms