Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC034205.1-201ENST00000520621 638 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC018659.2-201ENST00000624690 715 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC092159.4-201ENST00000624944 550 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC083865.1-201ENST00000636634 831 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 OR6C71P-202ENST00000641886 1107 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 AC116158.1-201ENST00000560231 2129 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.74□□□□□ -1.33
VTA1Q9NP79 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VTA1Q9NP79 CDY5P-201ENST00000411487 1580 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 CDY9P-201ENST00000451397 1580 ntBASIC6.74□□□□□ -1.33
VTA1Q9NP79 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 PTCD2P2-201ENST00000415579 1095 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 TCEA1P2-201ENST00000420496 906 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 MTND2P2-201ENST00000434633 945 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 RPS27P5-201ENST00000444247 244 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 NPM1P19-201ENST00000450070 712 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC020779.1-201ENST00000478757 796 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 RN7SL284P-201ENST00000498823 275 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 ATP5LP3-201ENST00000514223 304 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 RFPL4AP3-201ENST00000515267 345 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 RNA5SP362-201ENST00000516048 118 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC010735.1-201ENST00000567305 1026 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC015802.2-201ENST00000589690 189 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC073137.1-201ENST00000605636 634 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC004908.3-201ENST00000610248 625 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 PARP4P2-201ENST00000446672 3326 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AL591848.4-201ENST00000567832 3472 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AL359715.4-201ENST00000606629 1436 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 CR788268.1-201ENST00000603931 1809 ntBASIC6.73□□□□□ -1.33
VTA1Q9NP79 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VTA1Q9NP79 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VTA1Q9NP79 AC079298.1-201ENST00000625026 1619 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC005618.1-201ENST00000606901 3148 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
VTA1Q9NP79 AC007618.1-201ENST00000366455 732 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VTA1Q9NP79 UBE2V1P11-201ENST00000411559 285 ntBASIC6.72□□□□□ -1.33
VTA1Q9NP79 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms