Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC40Q9H9A6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRRC40Q9H9A6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC40Q9H9A6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC40Q9H9A6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRRC40Q9H9A6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.58□□□□□ -1.52
LRRC40Q9H9A6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LRRC40Q9H9A6 AC100757.1-201ENST00000616872 1835 ntBASIC5.58□□□□□ -1.52
LRRC40Q9H9A6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 RNA5SP46-201ENST00000362370 120 ntBASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 TAAR4P-201ENST00000454843 1039 ntBASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 LDHBP2-201ENST00000456969 1005 ntBASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AC010487.1-201ENST00000594408 1172 ntBASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AP002884.5-201ENST00000595053 1132 ntBASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AC012616.1-201ENST00000600294 197 ntBASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 VN1R81P-201ENST00000602085 372 ntBASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 AC112255.1-201ENST00000624070 2493 ntBASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC40Q9H9A6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC091305.2-201ENST00000624049 1576 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC079809.1-201ENST00000415468 276 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AL136231.1-201ENST00000429407 730 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 EEF1B2P6-201ENST00000445713 673 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 CBX1P2-201ENST00000453841 458 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AGGF1P3-201ENST00000493675 1213 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC020937.1-201ENST00000519677 1013 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AL049872.1-201ENST00000556323 322 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC027216.1-201ENST00000577726 685 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC027243.2-201ENST00000602530 724 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AL356608.1-201ENST00000610034 820 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC008115.3-201ENST00000614874 549 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AL589935.2-201ENST00000616471 1231 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC007683.2-201ENST00000624681 714 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 AC073869.8-201ENST00000641806 335 ntBASIC5.56□□□□□ -1.52
LRRC40Q9H9A6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms