Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.1□□□□□ -1.43
CCSER1Q9C0I3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 RNA5SP234-201ENST00000363916 119 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 U3.25-201ENST00000391209 220 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 SMC4P1-201ENST00000414479 527 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 Z93019.1-201ENST00000416450 973 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC009506.2-201ENST00000420635 840 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 SRSF1P1-201ENST00000424058 520 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 MRPS21P2-201ENST00000424704 264 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 PRUNEP1-201ENST00000425846 705 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AL390119.1-201ENST00000440329 312 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC090804.1-201ENST00000448870 490 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC108751.3-201ENST00000461814 1020 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 SUMO2P4-201ENST00000504193 276 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 HMGN1P9-201ENST00000515212 298 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC130364.2-201ENST00000528639 604 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 RN7SL356P-201ENST00000582228 248 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC004477.3-201ENST00000614061 590 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC244517.3-201ENST00000616254 1235 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 MIR6729-201ENST00000618194 65 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AL691477.1-201ENST00000624398 162 ntBASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.09□□□□□ -1.43
CCSER1Q9C0I3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCSER1Q9C0I3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 NLRP3P1-201ENST00000622303 1785 ntBASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AL136231.1-201ENST00000429407 730 ntBASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AC092754.1-201ENST00000472975 479 ntBASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AC090638.1-201ENST00000498296 909 ntBASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AL589674.2-201ENST00000604304 337 ntBASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AC000068.2-201ENST00000608816 460 ntBASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 MIR6886-201ENST00000619864 61 ntBASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AP003400.3-201ENST00000624904 346 ntBASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AC109446.4-201ENST00000623235 2755 ntBASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.08□□□□□ -1.44
CCSER1Q9C0I3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 AC005261.6-201ENST00000623072 1387 ntBASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCSER1Q9C0I3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms