Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC103591.2-201ENST00000265259 766 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM4Q9C037 SNORA21-201ENST00000362423 132 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM4Q9C037 AL445213.1-201ENST00000412589 747 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AL354890.1-201ENST00000413730 346 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 OR3D1P-201ENST00000438288 955 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 ZNF619P1-201ENST00000446539 752 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 RN7SL352P-201ENST00000466002 277 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 RPL23AP40-201ENST00000487630 390 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 RN7SL466P-201ENST00000497546 295 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 USP9YP2-201ENST00000504503 1000 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 USP9YP1-201ENST00000513521 1002 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 SCARNA18.1-201ENST00000516330 83 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 OR7E158P-201ENST00000524483 910 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC084824.2-201ENST00000548906 345 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 AP002884.5-201ENST00000595053 1132 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC015712.7-201ENST00000615211 635 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC096861.1-201ENST00000616652 240 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 AL357562.1-201ENST00000624911 609 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM4Q9C037 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM4Q9C037 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 AC235565.1-201ENST00000456962 1325 ntBASIC5.68□□□□□ -1.5
TRIM4Q9C037 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM4Q9C037 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM4Q9C037 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM4Q9C037 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 HYALP1-201ENST00000417674 1279 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 RPA2P2-201ENST00000419698 796 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 AL512637.1-201ENST00000439523 1231 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 AC005077.1-201ENST00000449226 375 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 AL645937.3-201ENST00000453647 936 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 AL133445.1-201ENST00000467051 452 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 RN7SL188P-201ENST00000469842 285 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 UBA52P7-201ENST00000486088 380 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 CCDC11P1-201ENST00000503137 1162 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 AC109481.1-201ENST00000509173 282 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 CYCSP22-201ENST00000517555 339 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 MIR7155-201ENST00000615925 56 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 MIR6133-201ENST00000617057 108 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 OR8G3P-202ENST00000641572 1255 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 MIR193BHG-214ENST00000641765 509 ntBASIC5.67□□□□□ -1.5
TRIM4Q9C037 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
TRIM4Q9C037 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM4Q9C037 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM4Q9C037 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM4Q9C037 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRIM4Q9C037 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM4Q9C037 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TRIM4Q9C037 AC004817.4-201ENST00000602396 3625 ntBASIC5.66□□□□□ -1.5
TRIM4Q9C037 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM4Q9C037 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM4Q9C037 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRIM4Q9C037 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM4Q9C037 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM4Q9C037 FABP12P1-201ENST00000401911 322 ntBASIC5.66□□□□□ -1.5
TRIM4Q9C037 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM4Q9C037 RN7SKP97-201ENST00000410966 333 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms