Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 OR2AF1P-201ENST00000454899 889 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 MTATP6P1-201ENST00000514057 681 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AL049872.1-201ENST00000556323 322 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC007066.2-202ENST00000566531 914 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 OOSP1P2-201ENST00000579644 351 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC008115.3-201ENST00000614874 549 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC010809.3-201ENST00000621310 641 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AC114786.1-201ENST00000512892 1415 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL21A1Q96P44 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL21A1Q96P44 AL603750.1-201ENST00000624216 1717 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL21A1Q96P44 YES1P1-201ENST00000418510 1628 ntBASIC5.19□□□□□ -1.58
COL21A1Q96P44 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL21A1Q96P44 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 MT-RNR2-201ENST00000387347 1559 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 TRAV35-201ENST00000390462 330 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 NPM1P38-201ENST00000403835 865 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 AL009179.1-201ENST00000406085 265 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 GAPDHP42-201ENST00000406848 981 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 RNA5SP178-201ENST00000410380 128 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 RN7SKP286-201ENST00000410894 299 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 RPSAP35-201ENST00000413753 818 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 BMS1P17-202ENST00000416720 316 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC006335.2-201ENST00000437993 330 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 RNU6-964P-201ENST00000516524 69 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 MIR4505-201ENST00000582238 73 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 H3F3BP2-201ENST00000583907 357 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC006363.1-201ENST00000603806 463 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 RN7SL787P-201ENST00000613000 284 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC007683.2-201ENST00000624681 714 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 FRG1EP-201ENST00000634469 770 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC103703.1-201ENST00000634783 663 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC006206.1-201ENST00000544842 3387 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 LINC01963-201ENST00000562038 3148 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 AC003985.2-201ENST00000562268 1669 ntBASIC5.18□□□□□ -1.58
COL21A1Q96P44 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL21A1Q96P44 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.18□□□□□ -1.58
COL21A1Q96P44 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COL21A1Q96P44 AC020633.1-201ENST00000468439 2247 ntBASIC5.17□□□□□ -1.58
COL21A1Q96P44 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.17□□□□□ -1.58
COL21A1Q96P44 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.17□□□□□ -1.58
COL21A1Q96P44 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.17□□□□□ -1.58
COL21A1Q96P44 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.17□□□□□ -1.58
COL21A1Q96P44 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL21A1Q96P44 AL359715.3-201ENST00000569267 2123 ntBASIC5.17□□□□□ -1.58
COL21A1Q96P44 AL078595.2-201ENST00000605309 1780 ntBASIC5.17□□□□□ -1.58
COL21A1Q96P44 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL21A1Q96P44 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL21A1Q96P44 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.17□□□□□ -1.58
COL21A1Q96P44 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL21A1Q96P44 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL21A1Q96P44 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL21A1Q96P44 SNORA17A-201ENST00000391185 133 ntBASIC5.17□□□□□ -1.58
COL21A1Q96P44 RANP7-201ENST00000418085 644 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms