Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 AC027506.1-201ENST00000621395 198 ntBASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 AC079416.3-201ENST00000624479 549 ntBASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 MIR665-201ENST00000635949 72 ntBASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 AC140479.4-205ENST00000636339 820 ntBASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 OR7A1P-202ENST00000641542 1158 ntBASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 AC012321.1-201ENST00000561622 1588 ntBASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 SSXP3-201ENST00000442971 1300 ntBASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLPTM1LQ96KA5 AC004656.1-201ENST00000568479 4951 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC005224.3-201ENST00000584683 2140 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 MT-RNR2-201ENST00000387347 1559 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 RNA5SP382-201ENST00000363355 112 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 U3.52-201ENST00000384034 216 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 SNORD116-12-201ENST00000384468 92 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 Y_RNA.578-201ENST00000390903 88 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 RNU6-244P-201ENST00000391028 104 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 FDPSP5-201ENST00000399474 1057 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AL136310.1-201ENST00000404926 654 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC024937.2-201ENST00000411669 1242 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AL359633.1-201ENST00000421403 310 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 MRPS21P2-201ENST00000424704 264 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 RPL23AP4-201ENST00000427757 463 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 RPS19P6-201ENST00000441327 433 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 MTND2P22-201ENST00000444325 1033 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AL050341.1-201ENST00000447743 313 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 ST13P21-201ENST00000453250 1098 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 RANP2-201ENST00000456833 229 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AP000563.1-201ENST00000490865 758 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC023050.1-201ENST00000498198 304 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC138866.2-201ENST00000508650 584 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 GUSBP9-201ENST00000510138 584 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC074087.1-201ENST00000512059 724 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 OR5AK3P-201ENST00000527486 1297 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 SLC25A51P2-201ENST00000535708 889 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 MIR744-201ENST00000578242 98 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 MIR5010-201ENST00000582846 120 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC015802.2-201ENST00000589690 189 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 OR8G7P-201ENST00000616658 848 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 RNA5SP439-201ENST00000617595 124 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 MIR6085-201ENST00000618314 110 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 U6.48-201ENST00000618523 106 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AL121895.2-201ENST00000619558 447 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC112694.2-201ENST00000623697 768 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC005753.1-201ENST00000623837 618 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 AC027559.1-201ENST00000636288 271 ntBASIC5.9□□□□□ -1.46
CLPTM1LQ96KA5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 AL355488.2-201ENST00000609909 2850 ntBASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 AC114774.1-201ENST00000507410 1770 ntBASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 VN2R3P-201ENST00000422626 1412 ntBASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CLPTM1LQ96KA5 AC090181.3-201ENST00000624777 1514 ntBASIC5.89□□□□□ -1.47
CLPTM1LQ96KA5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1LQ96KA5 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1LQ96KA5 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLPTM1LQ96KA5 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms