Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC092106.1-201ENST00000444291 373 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 RAD1P2-201ENST00000446414 663 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AL389915.2-201ENST00000454576 441 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AL035090.1-201ENST00000454835 332 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 RNA5SP228-201ENST00000516232 133 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AC026616.1-201ENST00000523157 525 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 HMGB1P40-201ENST00000525121 540 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AC023389.2-201ENST00000580031 955 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AC006116.3-201ENST00000592968 361 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AP002799.1-201ENST00000623552 423 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AC074101.1-201ENST00000637861 241 ntBASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD4Q5XG99 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC006511.3-201ENST00000624929 1783 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 MIR133B-201ENST00000362210 119 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AL121835.1-201ENST00000404250 354 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 SETP9-201ENST00000423837 832 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 XKRYP6-201ENST00000440468 1116 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 XKRYP3-201ENST00000442113 1116 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 OSTCP1-201ENST00000455507 450 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 SNRPCP2-201ENST00000504370 475 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 IGLV3-24-201ENST00000517477 197 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 OR11J2P-201ENST00000555298 907 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC106730.2-201ENST00000566641 540 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 OR1F2P-201ENST00000570470 933 ntBASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD4Q5XG99 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 ZNF658B-201ENST00000602828 3408 ntBASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 MFSD8-239ENST00000641590 2479 ntBASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 RNU1-43P-201ENST00000365052 165 ntBASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 AP003170.5-201ENST00000397185 335 ntBASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 NPM1P10-201ENST00000398310 865 ntBASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 AC096644.3-201ENST00000416788 338 ntBASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 FABP7P2-201ENST00000429946 379 ntBASIC5.49□□□□□ -1.53
LYSMD4Q5XG99 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms