Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC007224.1-201ENST00000564410 144 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AC090607.5-201ENST00000615692 224 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.28□□□□□ -1.56
RIF1Q5UIP0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 RPL32P23-201ENST00000397237 405 ntBASIC5.27□□□□□ -1.57
RIF1Q5UIP0 AL158073.1-201ENST00000426848 1104 ntBASIC5.27□□□□□ -1.57
RIF1Q5UIP0 AC023141.6-201ENST00000429418 337 ntBASIC5.27□□□□□ -1.57
RIF1Q5UIP0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 CYP4F27P-201ENST00000514557 494 ntBASIC5.27□□□□□ -1.57
RIF1Q5UIP0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 MIR4444-1-201ENST00000581696 74 ntBASIC5.27□□□□□ -1.57
RIF1Q5UIP0 MIR4444-2-201ENST00000584390 74 ntBASIC5.27□□□□□ -1.57
RIF1Q5UIP0 AL445647.2-201ENST00000615170 130 ntBASIC5.27□□□□□ -1.57
RIF1Q5UIP0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.27□□□□□ -1.57
RIF1Q5UIP0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RIF1Q5UIP0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 RNA5SP113-201ENST00000410486 84 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 DDX39BP1-205ENST00000422507 192 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC083829.1-201ENST00000503756 657 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC084824.1-201ENST00000550917 1005 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AL445423.1-201ENST00000609941 536 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC034229.5-201ENST00000624258 185 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC010168.2-201ENST00000562691 5428 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 MIR551A-201ENST00000385042 96 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 COX6B1P5-201ENST00000509843 249 ntBASIC5.26□□□□□ -1.57
RIF1Q5UIP0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RIF1Q5UIP0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 OR4K15-201ENST00000305051 1216 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 RNA5SP387-201ENST00000364226 106 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 ATG4AP1-201ENST00000416893 538 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 RNU1-88P-201ENST00000459274 128 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 NIP7P2-201ENST00000485801 544 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 SCARNA9-201ENST00000530422 353 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 SALL4P7-201ENST00000555779 3120 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 VN1R85P-201ENST00000601587 426 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 AC024941.1-201ENST00000612250 334 ntBASIC5.25□□□□□ -1.57
RIF1Q5UIP0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.25□□□□□ -1.57
RIF1Q5UIP0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms