Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC38Q502W7 uc_338.26-201ENST00000612659 160 ntBASIC6.12□□□□□ -1.43
CCDC38Q502W7 FRG1DP-201ENST00000635586 771 ntBASIC6.12□□□□□ -1.43
CCDC38Q502W7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CCDC38Q502W7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC38Q502W7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC007382.1-201ENST00000624376 2618 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 RNA5SP279-201ENST00000365513 117 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 RBBP4P5-201ENST00000398583 1266 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 CHMP1B2P-201ENST00000399581 597 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AL132875.1-201ENST00000403623 949 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 RNA5SP198-201ENST00000410376 127 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AL035422.1-201ENST00000414193 397 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 NPM1P18-201ENST00000434232 732 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 GAPDHP59-201ENST00000435908 267 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 RPSAP40-201ENST00000442343 891 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 OR7E22P-201ENST00000478335 1035 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC006115.2-201ENST00000596823 202 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC005828.7-201ENST00000607331 556 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AL080312.2-201ENST00000613001 630 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 SNX18P12-201ENST00000624821 759 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC073488.6-201ENST00000632293 754 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC073869.7-201ENST00000640874 297 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC130304.1-201ENST00000622942 2385 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
CCDC38Q502W7 AC114774.1-201ENST00000507410 1770 ntBASIC6.11□□□□□ -1.43
CCDC38Q502W7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC38Q502W7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 YWHAZP6-201ENST00000399764 738 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 ATP5F1P6-201ENST00000402768 767 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 TATDN1P1-201ENST00000414123 891 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 RPS7P8-201ENST00000418311 581 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AL139158.1-201ENST00000424719 340 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC092865.3-201ENST00000425390 1026 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 AL136231.1-201ENST00000429407 730 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 RPSAP65-201ENST00000429660 595 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC38Q502W7 SDC4P-201ENST00000453285 601 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 RPS4XP12-201ENST00000461747 709 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC098818.1-201ENST00000478593 252 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC38Q502W7 RN7SL205P-201ENST00000490174 284 ntBASIC6.1□□□□□ -1.43
CCDC38Q502W7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms