Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 AC004825.1-201ENST00000555068 586 ntBASIC6.03□□□□□ -1.44
USP41Q3LFD5 NPM1P42-201ENST00000560329 862 ntBASIC6.03□□□□□ -1.44
USP41Q3LFD5 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP41Q3LFD5 AL021707.7-201ENST00000607991 416 ntBASIC6.03□□□□□ -1.44
USP41Q3LFD5 AP005131.7-201ENST00000610087 611 ntBASIC6.03□□□□□ -1.44
USP41Q3LFD5 AC020763.5-201ENST00000623298 430 ntBASIC6.03□□□□□ -1.44
USP41Q3LFD5 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 SAMMSON-209ENST00000641222 1100 ntBASIC6.03□□□□□ -1.44
USP41Q3LFD5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 AC090220.1-201ENST00000593078 1699 ntBASIC6.03□□□□□ -1.44
USP41Q3LFD5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP41Q3LFD5 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
USP41Q3LFD5 C4BPAP1-201ENST00000415474 1893 ntBASIC6.02□□□□□ -1.44
USP41Q3LFD5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.02□□□□□ -1.44
USP41Q3LFD5 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 PABPC1P6-201ENST00000445594 1829 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 MFSD8-239ENST00000641590 2479 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 CDY11P-201ENST00000447168 1651 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 RN7SKP186-201ENST00000365371 303 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 MT-RNR1-201ENST00000389680 954 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC019070.1-201ENST00000415008 1024 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 VN1R21P-201ENST00000426703 765 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 BX276092.6-201ENST00000430476 250 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 VDAC2P4-201ENST00000452925 711 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 C1DP3-201ENST00000455013 423 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 BX276092.8-201ENST00000455722 250 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC006115.2-201ENST00000596823 202 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 AL512329.2-201ENST00000607350 548 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC018445.2-201ENST00000622987 260 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC091948.2-201ENST00000636510 279 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC005224.3-201ENST00000584683 2140 ntBASIC6.02□□□□□ -1.45
USP41Q3LFD5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP41Q3LFD5 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
USP41Q3LFD5 AC022417.1-201ENST00000624768 1303 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP41Q3LFD5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP41Q3LFD5 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP41Q3LFD5 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP41Q3LFD5 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP41Q3LFD5 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP41Q3LFD5 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 AL607077.1-201ENST00000401718 499 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 AC007064.3-201ENST00000422608 359 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 AL590399.4-201ENST00000436561 601 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 CYCSP12-201ENST00000437729 300 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 KRT8P51-201ENST00000438938 274 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 MEMO1P4-201ENST00000453590 386 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 RPL7P45-201ENST00000455851 743 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 AC090602.1-201ENST00000469695 252 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.01□□□□□ -1.45
USP41Q3LFD5 TRBV5-2-201ENST00000489095 273 ntBASIC6.01□□□□□ -1.45
USP41Q3LFD5 DUTP1-201ENST00000493631 470 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 242.3 ms