Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 DUTP7-201ENST00000507982 486 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 AC022360.1-201ENST00000521058 340 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 AP006245.2-201ENST00000522004 300 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX4Q33E94 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.07□□□□□ -1.6
RFX4Q33E94 AC026826.3-201ENST00000561747 158 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 AC114947.2-201ENST00000565748 2125 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.07□□□□□ -1.6
RFX4Q33E94 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.07□□□□□ -1.6
RFX4Q33E94 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX4Q33E94 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.07□□□□□ -1.6
RFX4Q33E94 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFX4Q33E94 AL034549.2-201ENST00000618285 3373 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RFX4Q33E94 AC079298.1-201ENST00000625026 1619 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 DDX18P6-201ENST00000450119 1997 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 AL731566.1-201ENST00000620490 1937 ntBASIC5.07□□□□□ -1.6
RFX4Q33E94 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RFX4Q33E94 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RFX4Q33E94 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFX4Q33E94 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.06□□□□□ -1.6
RFX4Q33E94 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RFX4Q33E94 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFX4Q33E94 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AK4P4-201ENST00000419465 646 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 AC104333.2-201ENST00000422630 192 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 NDUFS5P5-201ENST00000437256 321 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AMYP1-201ENST00000440059 1023 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC005165.2-201ENST00000466070 380 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 RPSAP37-201ENST00000470913 821 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 AC022133.1-201ENST00000490961 571 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.06□□□□□ -1.6
RFX4Q33E94 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.06□□□□□ -1.6
RFX4Q33E94 HSPE1P2-201ENST00000554777 306 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC007066.2-202ENST00000566531 914 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC006272.2-201ENST00000594725 163 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 AC063977.5-201ENST00000601044 974 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 AL591926.1-201ENST00000620542 217 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 AC073869.8-201ENST00000641806 335 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC003973.3-201ENST00000624863 2822 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 LYARP1-201ENST00000436977 1501 ntBASIC5.06□□□□□ -1.6
RFX4Q33E94 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX4Q33E94 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.06□□□□□ -1.6
RFX4Q33E94 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX4Q33E94 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX4Q33E94 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX4Q33E94 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX4Q33E94 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX4Q33E94 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFX4Q33E94 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX4Q33E94 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX4Q33E94 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX4Q33E94 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RFX4Q33E94 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFX4Q33E94 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX4Q33E94 RNU1-65P-201ENST00000363919 148 ntBASIC5.05□□□□□ -1.6
RFX4Q33E94 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX4Q33E94 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RFX4Q33E94 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.05□□□□□ -1.6
RFX4Q33E94 RANP7-201ENST00000418085 644 ntBASIC5.05□□□□□ -1.6
RFX4Q33E94 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.05□□□□□ -1.6
RFX4Q33E94 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.05□□□□□ -1.6
RFX4Q33E94 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.05□□□□□ -1.6
RFX4Q33E94 AC068491.1-201ENST00000449539 1241 ntBASIC5.05□□□□□ -1.6
RFX4Q33E94 AL450023.1-201ENST00000450868 751 ntBASIC5.05□□□□□ -1.6
RFX4Q33E94 AC138409.2-202ENST00000507274 458 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms