Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 U3.28-201ENST00000391249 210 ntBASIC4.1□□□□□ -1.75
CMC4P56277 AL513325.1-201ENST00000417716 1034 ntBASIC4.1□□□□□ -1.75
CMC4P56277 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.1□□□□□ -1.75
CMC4P56277 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CMC4P56277 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.1□□□□□ -1.75
CMC4P56277 AC023271.1-201ENST00000445936 1090 ntBASIC4.1□□□□□ -1.75
CMC4P56277 AZGP1P2-201ENST00000454506 345 ntBASIC4.1□□□□□ -1.75
CMC4P56277 RPL7P45-201ENST00000455851 743 ntBASIC4.1□□□□□ -1.75
CMC4P56277 AC104849.1-201ENST00000462623 405 ntBASIC4.1□□□□□ -1.75
CMC4P56277 AC100832.1-201ENST00000471945 383 ntBASIC4.1□□□□□ -1.75
CMC4P56277 RN7SL174P-201ENST00000475578 289 ntBASIC4.1□□□□□ -1.75
CMC4P56277 USP9YP2-201ENST00000504503 1000 ntBASIC4.1□□□□□ -1.75
CMC4P56277 AC106872.4-201ENST00000510050 523 ntBASIC4.1□□□□□ -1.75
CMC4P56277 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.1□□□□□ -1.75
CMC4P56277 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.1□□□□□ -1.75
CMC4P56277 USP9YP1-201ENST00000513521 1002 ntBASIC4.1□□□□□ -1.75
CMC4P56277 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.1□□□□□ -1.75
CMC4P56277 AC007225.2-201ENST00000562529 256 ntBASIC4.1□□□□□ -1.75
CMC4P56277 AC234775.3-201ENST00000564612 656 ntBASIC4.1□□□□□ -1.75
CMC4P56277 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.1□□□□□ -1.75
CMC4P56277 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.1□□□□□ -1.75
CMC4P56277 AC009237.12-201ENST00000604755 742 ntBASIC4.1□□□□□ -1.75
CMC4P56277 MIR6768-201ENST00000610734 72 ntBASIC4.1□□□□□ -1.75
CMC4P56277 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.1□□□□□ -1.75
CMC4P56277 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.1□□□□□ -1.75
CMC4P56277 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.1□□□□□ -1.75
CMC4P56277 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.1□□□□□ -1.75
CMC4P56277 AL049767.1-202ENST00000637826 242 ntBASIC4.1□□□□□ -1.75
CMC4P56277 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CMC4P56277 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CMC4P56277 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.1□□□□□ -1.75
CMC4P56277 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CMC4P56277 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.1□□□□□ -1.75
CMC4P56277 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.1□□□□□ -1.75
CMC4P56277 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CMC4P56277 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CMC4P56277 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CMC4P56277 AC114774.1-201ENST00000507410 1770 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.09□□□□□ -1.75
CMC4P56277 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CMC4P56277 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.09□□□□□ -1.75
CMC4P56277 AC083899.1-201ENST00000454465 3819 ntBASIC4.09□□□□□ -1.75
CMC4P56277 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CMC4P56277 AC133552.1-201ENST00000569988 4007 ntBASIC4.09□□□□□ -1.75
CMC4P56277 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CMC4P56277 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CMC4P56277 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CMC4P56277 RN7SKP69-201ENST00000365390 305 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CMC4P56277 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CMC4P56277 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CMC4P56277 SNORA48.4-201ENST00000391089 134 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC007068.1-201ENST00000396690 844 ntBASIC4.09□□□□□ -1.75
CMC4P56277 RNA5SP487-201ENST00000410186 122 ntBASIC4.09□□□□□ -1.75
CMC4P56277 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.09□□□□□ -1.75
CMC4P56277 MTND4LP21-201ENST00000415303 295 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.09□□□□□ -1.75
CMC4P56277 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.09□□□□□ -1.75
CMC4P56277 AL359265.1-201ENST00000440296 795 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.09□□□□□ -1.75
CMC4P56277 GAPDHP25-201ENST00000447061 1001 ntBASIC4.09□□□□□ -1.75
CMC4P56277 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.09□□□□□ -1.75
CMC4P56277 AL133445.1-201ENST00000467051 452 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.09□□□□□ -1.75
CMC4P56277 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.09□□□□□ -1.75
CMC4P56277 RPL7L1P4-201ENST00000513004 707 ntBASIC4.09□□□□□ -1.75
CMC4P56277 IGKV3D-34-201ENST00000522638 302 ntBASIC4.09□□□□□ -1.75
CMC4P56277 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.09□□□□□ -1.75
CMC4P56277 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CMC4P56277 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.09□□□□□ -1.75
CMC4P56277 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.09□□□□□ -1.75
CMC4P56277 MIR4433B-201ENST00000581329 102 ntBASIC4.09□□□□□ -1.75
CMC4P56277 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.09□□□□□ -1.75
CMC4P56277 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.09□□□□□ -1.75
CMC4P56277 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.09□□□□□ -1.75
CMC4P56277 AC018809.2-201ENST00000602436 3823 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC005252.1-201ENST00000604518 1063 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC004477.3-201ENST00000614061 590 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AL354950.1-201ENST00000614150 568 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC022960.2-201ENST00000616300 666 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC009120.7-201ENST00000623452 780 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC073869.8-201ENST00000641806 335 ntBASIC4.09□□□□□ -1.75
CMC4P56277 AC144833.1-201ENST00000567953 4089 ntBASIC4.09□□□□□ -1.75
CMC4P56277 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CMC4P56277 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.09□□□□□ -1.75
CMC4P56277 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CMC4P56277 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CMC4P56277 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CMC4P56277 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CMC4P56277 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CMC4P56277 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
CMC4P56277 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CMC4P56277 AC004076.2-201ENST00000620532 3323 ntBASIC4.09□□□□□ -1.76
CMC4P56277 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CMC4P56277 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CMC4P56277 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CMC4P56277 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.08□□□□□ -1.76
CMC4P56277 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CMC4P56277 ABCC13-202ENST00000463099 3842 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms