Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.94□□□□□ -1.3
PMS1P54277 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.94□□□□□ -1.3
PMS1P54277 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.94□□□□□ -1.3
PMS1P54277 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.94□□□□□ -1.3
PMS1P54277 AC024267.2-201ENST00000582737 417 ntBASIC6.94□□□□□ -1.3
PMS1P54277 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PMS1P54277 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.94□□□□□ -1.3
PMS1P54277 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.94□□□□□ -1.3
PMS1P54277 AL354976.1-201ENST00000613843 387 ntBASIC6.94□□□□□ -1.3
PMS1P54277 AL121890.3-201ENST00000618494 516 ntBASIC6.94□□□□□ -1.3
PMS1P54277 AL158062.1-201ENST00000619632 745 ntBASIC6.94□□□□□ -1.3
PMS1P54277 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
PMS1P54277 KARSP1-201ENST00000451871 1752 ntBASIC6.94□□□□□ -1.3
PMS1P54277 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.94□□□□□ -1.3
PMS1P54277 AL121768.1-201ENST00000613917 2544 ntBASIC6.94□□□□□ -1.3
PMS1P54277 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.94□□□□□ -1.3
PMS1P54277 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PMS1P54277 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PMS1P54277 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
PMS1P54277 HDAC1P2-201ENST00000453661 1398 ntBASIC6.94□□□□□ -1.3
PMS1P54277 AL133243.2-201ENST00000610331 1621 ntBASIC6.94□□□□□ -1.3
PMS1P54277 AC092724.1-201ENST00000624623 3397 ntBASIC6.94□□□□□ -1.3
PMS1P54277 AC096921.2-201ENST00000561507 1916 ntBASIC6.93□□□□□ -1.3
PMS1P54277 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.93□□□□□ -1.3
PMS1P54277 AL049737.1-201ENST00000413920 1403 ntBASIC6.93□□□□□ -1.3
PMS1P54277 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PMS1P54277 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.93□□□□□ -1.3
PMS1P54277 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
PMS1P54277 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PMS1P54277 MIR433-201ENST00000384837 93 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AC003045.1-201ENST00000398779 713 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AL356968.2-201ENST00000412769 1257 ntBASIC6.93□□□□□ -1.3
PMS1P54277 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.93□□□□□ -1.3
PMS1P54277 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.93□□□□□ -1.3
PMS1P54277 AC023128.2-201ENST00000420880 1223 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AC011233.1-201ENST00000422812 283 ntBASIC6.93□□□□□ -1.3
PMS1P54277 C1DP1-201ENST00000426049 402 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AL022324.2-201ENST00000434827 780 ntBASIC6.93□□□□□ -1.3
PMS1P54277 ARMC4P1-201ENST00000438905 707 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.93□□□□□ -1.3
PMS1P54277 AL592437.1-201ENST00000443781 492 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.93□□□□□ -1.3
PMS1P54277 HMGB1P5-202ENST00000451497 985 ntBASIC6.93□□□□□ -1.3
PMS1P54277 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.93□□□□□ -1.3
PMS1P54277 VPS25P1-201ENST00000455691 508 ntBASIC6.93□□□□□ -1.3
PMS1P54277 RNU7-125P-201ENST00000458760 62 ntBASIC6.93□□□□□ -1.3
PMS1P54277 MTND3P7-201ENST00000474435 343 ntBASIC6.93□□□□□ -1.3
PMS1P54277 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 AC015524.1-201ENST00000491585 472 ntBASIC6.93□□□□□ -1.3
PMS1P54277 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.93□□□□□ -1.3
PMS1P54277 RFPL1S-203ENST00000539579 330 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.93□□□□□ -1.3
PMS1P54277 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.93□□□□□ -1.3
PMS1P54277 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.93□□□□□ -1.3
PMS1P54277 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 AC022662.1-201ENST00000580252 331 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AC022069.1-201ENST00000582910 658 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AL591222.2-201ENST00000604443 754 ntBASIC6.93□□□□□ -1.3
PMS1P54277 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 AL450489.1-201ENST00000612071 468 ntBASIC6.93□□□□□ -1.3
PMS1P54277 MIR6885-201ENST00000612241 66 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AL157770.1-201ENST00000623049 439 ntBASIC6.93□□□□□ -1.3
PMS1P54277 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.93□□□□□ -1.3
PMS1P54277 AC010608.2-201ENST00000624830 470 ntBASIC6.93□□□□□ -1.3
PMS1P54277 AC092184.1-201ENST00000625042 715 ntBASIC6.93□□□□□ -1.3
PMS1P54277 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PMS1P54277 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
PMS1P54277 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PMS1P54277 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 AL359976.1-201ENST00000418655 3528 ntBASIC6.93□□□□□ -1.3
PMS1P54277 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PMS1P54277 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.93□□□□□ -1.3
PMS1P54277 AC125238.2-201ENST00000430003 1440 ntBASIC6.93□□□□□ -1.3
PMS1P54277 MTCO1P18-201ENST00000455518 1419 ntBASIC6.93□□□□□ -1.3
PMS1P54277 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.92□□□□□ -1.3
PMS1P54277 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.92□□□□□ -1.3
PMS1P54277 AC005225.5-201ENST00000623547 2225 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms