Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
MRE11P49959 AC018926.1-201ENST00000616335 435 ntBASIC6.99□□□□□ -1.29
MRE11P49959 AC126175.1-201ENST00000617041 758 ntBASIC6.99□□□□□ -1.29
MRE11P49959 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.99□□□□□ -1.29
MRE11P49959 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
MRE11P49959 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
MRE11P49959 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
MRE11P49959 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
MRE11P49959 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 AC024587.1-201ENST00000505925 2157 ntBASIC6.98□□□□□ -1.29
MRE11P49959 LYARP1-201ENST00000436977 1501 ntBASIC6.98□□□□□ -1.29
MRE11P49959 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
MRE11P49959 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 RNU6-1257P-201ENST00000384625 110 ntBASIC6.98□□□□□ -1.29
MRE11P49959 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.98□□□□□ -1.29
MRE11P49959 Z77249.1-201ENST00000444622 1175 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AL161636.2-201ENST00000445179 927 ntBASIC6.98□□□□□ -1.29
MRE11P49959 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
MRE11P49959 AC009963.3-201ENST00000458090 486 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AC068228.1-201ENST00000461723 211 ntBASIC6.98□□□□□ -1.29
MRE11P49959 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 RN7SL352P-201ENST00000466002 277 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AC007998.1-201ENST00000474156 672 ntBASIC6.98□□□□□ -1.29
MRE11P49959 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.98□□□□□ -1.29
MRE11P49959 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.98□□□□□ -1.29
MRE11P49959 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.98□□□□□ -1.29
MRE11P49959 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
MRE11P49959 RN7SKP265-201ENST00000516448 223 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.98□□□□□ -1.29
MRE11P49959 EEF1A1P37-201ENST00000522748 715 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.98□□□□□ -1.29
MRE11P49959 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.98□□□□□ -1.29
MRE11P49959 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.98□□□□□ -1.29
MRE11P49959 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.98□□□□□ -1.29
MRE11P49959 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.98□□□□□ -1.29
MRE11P49959 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.98□□□□□ -1.29
MRE11P49959 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.98□□□□□ -1.29
MRE11P49959 AC107993.1-201ENST00000591343 684 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 ELOCP35-201ENST00000604289 336 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AP001437.1-201ENST00000608783 456 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AL121652.1-201ENST00000608851 448 ntBASIC6.98□□□□□ -1.29
MRE11P49959 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AP005431.1-201ENST00000618479 319 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AC006386.1-201ENST00000619436 415 ntBASIC6.98□□□□□ -1.29
MRE11P49959 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.98□□□□□ -1.29
MRE11P49959 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 AC239868.2-201ENST00000564237 4527 ntBASIC6.98□□□□□ -1.29
MRE11P49959 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 RNF19BPY-201ENST00000458209 1550 ntBASIC6.98□□□□□ -1.29
MRE11P49959 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.98□□□□□ -1.29
MRE11P49959 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.98□□□□□ -1.29
MRE11P49959 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
MRE11P49959 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
MRE11P49959 PARP4P2-201ENST00000446672 3326 ntBASIC6.98□□□□□ -1.29
MRE11P49959 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.97□□□□□ -1.29
MRE11P49959 TCP11X1-202ENST00000622971 1372 ntBASIC6.97□□□□□ -1.29
MRE11P49959 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
MRE11P49959 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
MRE11P49959 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
MRE11P49959 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
MRE11P49959 RNA5SP321-201ENST00000362722 111 ntBASIC6.97□□□□□ -1.29
MRE11P49959 RN7SKP115-201ENST00000363177 317 ntBASIC6.97□□□□□ -1.29
MRE11P49959 SNORA27.3-201ENST00000364937 134 ntBASIC6.97□□□□□ -1.29
MRE11P49959 U3.25-201ENST00000391209 220 ntBASIC6.97□□□□□ -1.29
MRE11P49959 FABP12P1-201ENST00000401911 322 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AL356057.1-202ENST00000402263 756 ntBASIC6.97□□□□□ -1.29
MRE11P49959 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
MRE11P49959 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
MRE11P49959 AC066692.1-201ENST00000421721 457 ntBASIC6.97□□□□□ -1.29
MRE11P49959 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.97□□□□□ -1.29
MRE11P49959 TET1P1-201ENST00000426627 2301 ntBASIC6.97□□□□□ -1.29
MRE11P49959 MTND6P12-201ENST00000428247 522 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.97□□□□□ -1.29
MRE11P49959 RPS27P18-201ENST00000431701 247 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.97□□□□□ -1.29
MRE11P49959 AC016908.1-201ENST00000442571 1219 ntBASIC6.97□□□□□ -1.29
MRE11P49959 GAPDHP33-201ENST00000443168 1013 ntBASIC6.97□□□□□ -1.29
MRE11P49959 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.97□□□□□ -1.29
MRE11P49959 OR6C72P-201ENST00000451403 892 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms