Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.55□□□□□ -1.36
TM4SF4P48230 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 AL583832.1-201ENST00000603227 784 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 AL022394.1-201ENST00000606979 292 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 AC005021.1-201ENST00000608730 355 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 AL159169.2-201ENST00000610061 1269 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 OR8G7P-201ENST00000616658 848 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.55□□□□□ -1.36
TM4SF4P48230 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.55□□□□□ -1.36
TM4SF4P48230 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF4P48230 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TM4SF4P48230 PANDAR-201ENST00000629595 1506 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 NCOA4P2-201ENST00000340589 1813 ntBASIC6.55□□□□□ -1.36
TM4SF4P48230 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF4P48230 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.54□□□□□ -1.36
TM4SF4P48230 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
TM4SF4P48230 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TM4SF4P48230 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
TM4SF4P48230 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TM4SF4P48230 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TM4SF4P48230 SNORA67-201ENST00000384423 137 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 DUTP5-201ENST00000406790 469 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.54□□□□□ -1.36
TM4SF4P48230 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.54□□□□□ -1.36
TM4SF4P48230 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF4P48230 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.54□□□□□ -1.36
TM4SF4P48230 FAM96AP1-201ENST00000430879 482 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF4P48230 AC015983.1-201ENST00000441577 373 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 XKRY2-201ENST00000442362 1093 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AC073648.4-201ENST00000442655 781 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.54□□□□□ -1.36
TM4SF4P48230 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.54□□□□□ -1.36
TM4SF4P48230 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.54□□□□□ -1.36
TM4SF4P48230 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF4P48230 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.54□□□□□ -1.36
TM4SF4P48230 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 RN7SKP99-201ENST00000517028 307 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF4P48230 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TM4SF4P48230 AC137768.1-201ENST00000549998 553 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF4P48230 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF4P48230 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.54□□□□□ -1.36
TM4SF4P48230 SNORD39.2-201ENST00000579995 76 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF4P48230 MTCO2P22-201ENST00000603246 681 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AC024589.2-201ENST00000605642 1294 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 AL645927.2-201ENST00000618350 349 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AC253576.2-201ENST00000618815 580 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AL158062.1-201ENST00000619632 745 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 PRNCR1-201ENST00000635449 12727 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 AC092724.1-201ENST00000624623 3397 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.54□□□□□ -1.36
TM4SF4P48230 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 AC010168.2-201ENST00000562691 5428 ntBASIC6.54□□□□□ -1.36
TM4SF4P48230 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.54□□□□□ -1.36
TM4SF4P48230 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC6.54□□□□□ -1.36
TM4SF4P48230 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
TM4SF4P48230 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF4P48230 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF4P48230 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.53□□□□□ -1.36
TM4SF4P48230 CTAGE11P-201ENST00000451540 2353 ntBASIC6.53□□□□□ -1.36
TM4SF4P48230 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF4P48230 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.53□□□□□ -1.36
TM4SF4P48230 CASC19-281ENST00000642118 1554 ntBASIC6.53□□□□□ -1.36
TM4SF4P48230 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF4P48230 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF4P48230 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF4P48230 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.53□□□□□ -1.36
TM4SF4P48230 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF4P48230 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF4P48230 RN7SKP6-201ENST00000364795 319 ntBASIC6.53□□□□□ -1.36
TM4SF4P48230 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF4P48230 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TM4SF4P48230 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF4P48230 AC234781.4-201ENST00000419384 244 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms