Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.21□□□□□ -1.58
APOBEC1P41238 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
APOBEC1P41238 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
APOBEC1P41238 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
APOBEC1P41238 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 Z86062.1-201ENST00000406773 777 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 RN7SKP17-201ENST00000411242 351 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AL357752.1-201ENST00000412817 349 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.21□□□□□ -1.58
APOBEC1P41238 NIFKP3-201ENST00000417799 865 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 MARK2P12-201ENST00000420129 585 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 SEC63P1-201ENST00000425785 1258 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.21□□□□□ -1.58
APOBEC1P41238 DNAJA1P5-201ENST00000440278 943 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.21□□□□□ -1.58
APOBEC1P41238 SNRPFP2-201ENST00000440710 251 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 GXYLT1P1-201ENST00000446657 490 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.21□□□□□ -1.58
APOBEC1P41238 RPL12P39-201ENST00000455456 496 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 NENFP3-201ENST00000503735 313 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.21□□□□□ -1.58
APOBEC1P41238 AC114781.3-201ENST00000512083 142 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 SCARNA6.1-201ENST00000516989 238 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC021678.3-201ENST00000517893 476 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC139365.2-201ENST00000517972 253 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 AC005363.1-201ENST00000530779 351 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.21□□□□□ -1.58
APOBEC1P41238 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.21□□□□□ -1.58
APOBEC1P41238 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.21□□□□□ -1.58
APOBEC1P41238 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.21□□□□□ -1.58
APOBEC1P41238 AC096996.1-201ENST00000563813 325 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC106785.3-201ENST00000564064 847 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.21□□□□□ -1.58
APOBEC1P41238 AC015911.5-201ENST00000587076 451 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.21□□□□□ -1.58
APOBEC1P41238 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.21□□□□□ -1.58
APOBEC1P41238 BMS1P7-201ENST00000602440 1052 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.21□□□□□ -1.58
APOBEC1P41238 AL139022.2-201ENST00000606934 443 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC004775.1-201ENST00000607389 753 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC090607.5-201ENST00000615692 224 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AL163051.2-201ENST00000618976 735 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC097460.3-201ENST00000623099 442 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC129915.3-201ENST00000634128 948 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.21□□□□□ -1.58
APOBEC1P41238 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
APOBEC1P41238 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
APOBEC1P41238 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
APOBEC1P41238 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.21□□□□□ -1.58
APOBEC1P41238 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
APOBEC1P41238 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOBEC1P41238 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 NEPNP-201ENST00000404786 1371 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.2□□□□□ -1.58
APOBEC1P41238 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
APOBEC1P41238 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 AL359955.1-201ENST00000455242 3275 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.2□□□□□ -1.58
APOBEC1P41238 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
APOBEC1P41238 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.2□□□□□ -1.58
APOBEC1P41238 HMGN1P20-201ENST00000411849 300 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
APOBEC1P41238 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.2□□□□□ -1.58
APOBEC1P41238 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.2□□□□□ -1.58
APOBEC1P41238 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.2□□□□□ -1.58
APOBEC1P41238 RNF10P1-201ENST00000418589 369 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 BTF3P9-201ENST00000418784 283 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 MTND2P9-201ENST00000422293 931 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 BX323845.3-201ENST00000428215 527 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.2□□□□□ -1.58
APOBEC1P41238 AL022331.1-201ENST00000429025 477 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.2□□□□□ -1.58
APOBEC1P41238 AP006222.1-205ENST00000450734 457 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 OR52E7P-201ENST00000452394 933 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.2□□□□□ -1.58
APOBEC1P41238 AC011476.1-201ENST00000466725 307 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 RPSAP37-201ENST00000470913 821 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC092902.1-201ENST00000486999 259 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.2□□□□□ -1.58
APOBEC1P41238 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms