Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 CDY17P-201ENST00000414121 1282 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40LGP29965 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40LGP29965 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40LGP29965 AC019205.1-201ENST00000421830 730 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 CDY8P-201ENST00000428380 1279 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40LGP29965 LINC00328-2P-201ENST00000436585 219 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40LGP29965 TIMM8BP2-201ENST00000445940 251 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 CDY20P-201ENST00000447528 1279 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 RPS23P2-201ENST00000463671 415 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 AC107015.1-201ENST00000466902 747 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD40LGP29965 HMGB3P16-201ENST00000508037 287 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 AC095052.1-201ENST00000509955 863 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40LGP29965 RN7SKP46-201ENST00000515942 234 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.9□□□□□ -1.63
CD40LGP29965 PMS2P3-207ENST00000529061 717 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40LGP29965 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40LGP29965 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.9□□□□□ -1.63
CD40LGP29965 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40LGP29965 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD40LGP29965 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.9□□□□□ -1.63
CD40LGP29965 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40LGP29965 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40LGP29965 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.9□□□□□ -1.63
CD40LGP29965 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40LGP29965 AC145423.1-201ENST00000605712 336 ntBASIC4.9□□□□□ -1.63
CD40LGP29965 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40LGP29965 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40LGP29965 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD40LGP29965 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CD40LGP29965 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD40LGP29965 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD40LGP29965 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD40LGP29965 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40LGP29965 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 RBPJP2-201ENST00000618187 1444 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40LGP29965 AC126323.6-202ENST00000568092 3511 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40LGP29965 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40LGP29965 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 MAPK10-349ENST00000641767 3661 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40LGP29965 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 RN7SKP28-201ENST00000364770 305 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 SNORD56.6-201ENST00000384569 71 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 RNU6-1320P-201ENST00000390838 107 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 RNU6-1269P-201ENST00000391139 107 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40LGP29965 OR5M12P-201ENST00000423388 929 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40LGP29965 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 RPL7P56-201ENST00000429441 717 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 PSMD10P2-201ENST00000432890 672 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40LGP29965 NPM1P39-201ENST00000449818 867 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 HMGB1P7-201ENST00000450921 612 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 RNU6-599P-201ENST00000459383 107 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 RNU6-1193P-201ENST00000459461 107 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AC098818.1-201ENST00000478593 252 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 RPS12P31-201ENST00000491419 398 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 RN7SL568P-201ENST00000493069 298 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AC093890.1-201ENST00000502554 540 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 NIFKP7-201ENST00000503365 834 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 HMGN1P9-201ENST00000515212 298 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 RNA5SP206-201ENST00000516703 121 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AP002981.1-201ENST00000517692 975 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AP001000.1-201ENST00000526843 742 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40LGP29965 AC090022.1-201ENST00000546569 311 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.89□□□□□ -1.63
CD40LGP29965 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.89□□□□□ -1.63
CD40LGP29965 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.89□□□□□ -1.63
CD40LGP29965 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40LGP29965 AC002519.2-203ENST00000567043 837 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.89□□□□□ -1.63
CD40LGP29965 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CD40LGP29965 AC068768.2-201ENST00000602352 343 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 AL645933.2-201ENST00000606743 1207 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 BX005214.3-202ENST00000619809 325 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 RNU6-368P-201ENST00000620928 107 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 RNU6-538P-201ENST00000622329 107 ntBASIC4.89□□□□□ -1.63
CD40LGP29965 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40LGP29965 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms