Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.81□□□□□ -1.48
CD40P25942 RNF6P1-201ENST00000444889 1784 ntBASIC5.81□□□□□ -1.48
CD40P25942 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.81□□□□□ -1.48
CD40P25942 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 RNU6-1200P-201ENST00000384162 107 ntBASIC5.81□□□□□ -1.48
CD40P25942 Y_RNA.560-201ENST00000384689 102 ntBASIC5.81□□□□□ -1.48
CD40P25942 MIR16-1-201ENST00000385271 89 ntBASIC5.81□□□□□ -1.48
CD40P25942 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.81□□□□□ -1.48
CD40P25942 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 VN1R21P-201ENST00000426703 765 ntBASIC5.81□□□□□ -1.48
CD40P25942 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 AC128677.1-201ENST00000436016 442 ntBASIC5.81□□□□□ -1.48
CD40P25942 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 GAPDHP37-201ENST00000442317 968 ntBASIC5.81□□□□□ -1.48
CD40P25942 CRYGGP-201ENST00000443337 145 ntBASIC5.81□□□□□ -1.48
CD40P25942 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 UBBP5-201ENST00000446970 266 ntBASIC5.81□□□□□ -1.48
CD40P25942 FAR2P1-206ENST00000449736 709 ntBASIC5.81□□□□□ -1.48
CD40P25942 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.81□□□□□ -1.48
CD40P25942 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.81□□□□□ -1.48
CD40P25942 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.81□□□□□ -1.48
CD40P25942 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 AC079395.1-201ENST00000510981 262 ntBASIC5.81□□□□□ -1.48
CD40P25942 AC109445.1-201ENST00000512356 383 ntBASIC5.81□□□□□ -1.48
CD40P25942 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.81□□□□□ -1.48
CD40P25942 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 AC011352.2-201ENST00000514574 1016 ntBASIC5.81□□□□□ -1.48
CD40P25942 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 OR8A2P-201ENST00000528631 952 ntBASIC5.81□□□□□ -1.48
CD40P25942 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.81□□□□□ -1.48
CD40P25942 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CD40P25942 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 AL591767.3-201ENST00000554632 525 ntBASIC5.81□□□□□ -1.48
CD40P25942 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 AGGF1P7-201ENST00000562369 913 ntBASIC5.81□□□□□ -1.48
CD40P25942 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 SNORA70D-201ENST00000578836 135 ntBASIC5.81□□□□□ -1.48
CD40P25942 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.81□□□□□ -1.48
CD40P25942 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 AC055764.2-201ENST00000610089 670 ntBASIC5.81□□□□□ -1.48
CD40P25942 AC004223.4-201ENST00000612426 332 ntBASIC5.81□□□□□ -1.48
CD40P25942 AL607023.1-201ENST00000620045 248 ntBASIC5.81□□□□□ -1.48
CD40P25942 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.81□□□□□ -1.48
CD40P25942 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 FP325313.1-201ENST00000638228 703 ntBASIC5.81□□□□□ -1.48
CD40P25942 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 AC005539.1-201ENST00000443768 1479 ntBASIC5.81□□□□□ -1.48
CD40P25942 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 AC093225.1-201ENST00000506867 1408 ntBASIC5.81□□□□□ -1.48
CD40P25942 SGO1P1-201ENST00000603525 1447 ntBASIC5.81□□□□□ -1.48
CD40P25942 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.81□□□□□ -1.48
CD40P25942 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.81□□□□□ -1.48
CD40P25942 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD40P25942 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 AL355852.1-201ENST00000454081 1771 ntBASIC5.8□□□□□ -1.48
CD40P25942 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 AC122713.2-201ENST00000624942 3335 ntBASIC5.8□□□□□ -1.48
CD40P25942 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 AL669831.5-218ENST00000591702 1873 ntBASIC5.8□□□□□ -1.48
CD40P25942 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 GSTA8P-201ENST00000404253 637 ntBASIC5.8□□□□□ -1.48
CD40P25942 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD40P25942 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.8□□□□□ -1.48
CD40P25942 P2RY10P2-201ENST00000416730 913 ntBASIC5.8□□□□□ -1.48
CD40P25942 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.8□□□□□ -1.48
CD40P25942 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.8□□□□□ -1.48
CD40P25942 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms