Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.84□□□□□ -0.99
PTPREP23469 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.84□□□□□ -0.99
PTPREP23469 MYO5BP3-201ENST00000431872 1279 ntBASIC8.84□□□□□ -0.99
PTPREP23469 AL353898.1-201ENST00000444055 238 ntBASIC8.84□□□□□ -0.99
PTPREP23469 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PTPREP23469 RPL7P12-201ENST00000446719 750 ntBASIC8.84□□□□□ -0.99
PTPREP23469 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.84□□□□□ -0.99
PTPREP23469 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PTPREP23469 AL133480.2-201ENST00000456723 487 ntBASIC8.84□□□□□ -0.99
PTPREP23469 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.84□□□□□ -0.99
PTPREP23469 LINC01085-203ENST00000511195 326 ntBASIC8.84□□□□□ -0.99
PTPREP23469 NPM1P21-201ENST00000513394 762 ntBASIC8.84□□□□□ -0.99
PTPREP23469 CUL4AP1-201ENST00000514750 1863 ntBASIC8.84□□□□□ -0.99
PTPREP23469 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.84□□□□□ -0.99
PTPREP23469 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.84□□□□□ -0.99
PTPREP23469 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.84□□□□□ -0.99
PTPREP23469 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC8.84□□□□□ -0.99
PTPREP23469 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.84□□□□□ -0.99
PTPREP23469 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC8.84□□□□□ -0.99
PTPREP23469 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.84□□□□□ -0.99
PTPREP23469 pRNA.12-201ENST00000614353 90 ntBASIC8.84□□□□□ -0.99
PTPREP23469 pRNA.3-201ENST00000615048 90 ntBASIC8.84□□□□□ -0.99
PTPREP23469 RMST_5.1-201ENST00000618704 126 ntBASIC8.84□□□□□ -0.99
PTPREP23469 ALG13-230ENST00000623189 458 ntTSL 3 BASIC8.84□□□□□ -0.99
PTPREP23469 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.84□□□□□ -0.99
PTPREP23469 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC8.84□□□□□ -0.99
PTPREP23469 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.84□□□□□ -0.99
PTPREP23469 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PTPREP23469 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.84□□□□□ -0.99
PTPREP23469 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.84□□□□□ -0.99
PTPREP23469 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
PTPREP23469 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PTPREP23469 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.84□□□□□ -0.99
PTPREP23469 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PTPREP23469 AC096745.2-201ENST00000627783 1914 ntBASIC8.84□□□□□ -1
PTPREP23469 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
PTPREP23469 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
PTPREP23469 AL080317.3-201ENST00000607434 4315 ntBASIC8.84□□□□□ -1
PTPREP23469 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.83□□□□□ -1
PTPREP23469 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 ZNF840P-201ENST00000504759 1996 ntBASIC8.83□□□□□ -1
PTPREP23469 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 RNU1-35P-201ENST00000362782 153 ntBASIC8.83□□□□□ -1
PTPREP23469 RNU6-451P-201ENST00000362921 107 ntBASIC8.83□□□□□ -1
PTPREP23469 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8.83□□□□□ -1
PTPREP23469 SRI-202ENST00000394641 653 ntTSL 2 BASIC8.83□□□□□ -1
PTPREP23469 AC113608.1-201ENST00000398740 305 ntBASIC8.83□□□□□ -1
PTPREP23469 GSTA10P-201ENST00000412182 576 ntBASIC8.83□□□□□ -1
PTPREP23469 OR9R1P-201ENST00000412200 877 ntBASIC8.83□□□□□ -1
PTPREP23469 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.83□□□□□ -1
PTPREP23469 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.83□□□□□ -1
PTPREP23469 RPL35AP12-201ENST00000425362 338 ntBASIC8.83□□□□□ -1
PTPREP23469 SNRPEP4-201ENST00000435815 279 ntBASIC8.83□□□□□ -1
PTPREP23469 AL137074.1-201ENST00000442640 465 ntBASIC8.83□□□□□ -1
PTPREP23469 AL672138.1-201ENST00000450604 1015 ntBASIC8.83□□□□□ -1
PTPREP23469 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.83□□□□□ -1
PTPREP23469 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC8.83□□□□□ -1
PTPREP23469 SCDP1-201ENST00000455244 1081 ntBASIC8.83□□□□□ -1
PTPREP23469 RNU6-1208P-201ENST00000459588 107 ntBASIC8.83□□□□□ -1
PTPREP23469 RPS4XP19-201ENST00000460237 736 ntBASIC8.83□□□□□ -1
PTPREP23469 RN7SL55P-201ENST00000464534 297 ntBASIC8.83□□□□□ -1
PTPREP23469 RN7SL283P-201ENST00000489055 303 ntBASIC8.83□□□□□ -1
PTPREP23469 NPY6R-201ENST00000503807 1112 ntBASIC8.83□□□□□ -1
PTPREP23469 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.83□□□□□ -1
PTPREP23469 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.83□□□□□ -1
PTPREP23469 OR7E87P-201ENST00000532397 929 ntBASIC8.83□□□□□ -1
PTPREP23469 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.83□□□□□ -1
PTPREP23469 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC8.83□□□□□ -1
PTPREP23469 AC069240.2-201ENST00000550242 609 ntBASIC8.83□□□□□ -1
PTPREP23469 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8.83□□□□□ -1
PTPREP23469 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.83□□□□□ -1
PTPREP23469 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC8.83□□□□□ -1
PTPREP23469 MIR5697-201ENST00000578045 78 ntBASIC8.83□□□□□ -1
PTPREP23469 RN7SL131P-201ENST00000579043 256 ntBASIC8.83□□□□□ -1
PTPREP23469 MIR4666A-201ENST00000580160 79 ntBASIC8.83□□□□□ -1
PTPREP23469 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.83□□□□□ -1
PTPREP23469 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.83□□□□□ -1
PTPREP23469 NUTF2P8-201ENST00000604593 363 ntBASIC8.83□□□□□ -1
PTPREP23469 AC090948.2-201ENST00000607363 564 ntBASIC8.83□□□□□ -1
PTPREP23469 AC090948.1-201ENST00000607464 549 ntBASIC8.83□□□□□ -1
PTPREP23469 AC069499.2-201ENST00000610665 382 ntBASIC8.83□□□□□ -1
PTPREP23469 AC068831.8-201ENST00000620171 435 ntBASIC8.83□□□□□ -1
PTPREP23469 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 AC009948.5-201ENST00000624360 4406 ntBASIC8.83□□□□□ -1
PTPREP23469 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.83□□□□□ -1
PTPREP23469 MAPK10-281ENST00000641170 3070 ntBASIC8.83□□□□□ -1
PTPREP23469 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PTPREP23469 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.82□□□□□ -1
PTPREP23469 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PTPREP23469 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTPREP23469 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTPREP23469 VEZF1P1-201ENST00000423931 1541 ntBASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms