Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.05□□□□□ -1.44
RB1P06400 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.05□□□□□ -1.44
RB1P06400 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.05□□□□□ -1.44
RB1P06400 RN7SKP288-201ENST00000516227 268 ntBASIC6.05□□□□□ -1.44
RB1P06400 RN7SKP248-201ENST00000516278 305 ntBASIC6.05□□□□□ -1.44
RB1P06400 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.05□□□□□ -1.44
RB1P06400 AC005000.1-201ENST00000536192 288 ntBASIC6.05□□□□□ -1.44
RB1P06400 AC004890.3-201ENST00000605566 1095 ntBASIC6.05□□□□□ -1.44
RB1P06400 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.05□□□□□ -1.44
RB1P06400 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.05□□□□□ -1.44
RB1P06400 AC126915.2-201ENST00000610957 190 ntBASIC6.05□□□□□ -1.44
RB1P06400 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.05□□□□□ -1.44
RB1P06400 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
RB1P06400 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
RB1P06400 AL137141.1-201ENST00000624622 4836 ntBASIC6.05□□□□□ -1.44
RB1P06400 AL161912.4-201ENST00000623889 2468 ntBASIC6.05□□□□□ -1.44
RB1P06400 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.05□□□□□ -1.44
RB1P06400 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.05□□□□□ -1.44
RB1P06400 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
RB1P06400 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.04□□□□□ -1.44
RB1P06400 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RB1P06400 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RB1P06400 MTHFD2P5-201ENST00000320415 844 ntBASIC6.04□□□□□ -1.44
RB1P06400 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RB1P06400 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RB1P06400 AL451142.1-201ENST00000375867 775 ntBASIC6.04□□□□□ -1.44
RB1P06400 MIR551A-201ENST00000385042 96 ntBASIC6.04□□□□□ -1.44
RB1P06400 AL589647.1-201ENST00000402485 466 ntBASIC6.04□□□□□ -1.44
RB1P06400 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.04□□□□□ -1.44
RB1P06400 AL139128.1-201ENST00000413921 941 ntBASIC6.04□□□□□ -1.44
RB1P06400 RPS17P17-201ENST00000419392 409 ntBASIC6.04□□□□□ -1.44
RB1P06400 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.04□□□□□ -1.44
RB1P06400 AJ239321.1-201ENST00000424255 564 ntBASIC6.04□□□□□ -1.44
RB1P06400 FAM204CP-201ENST00000424489 642 ntBASIC6.04□□□□□ -1.44
RB1P06400 FABP7P2-201ENST00000429946 379 ntBASIC6.04□□□□□ -1.44
RB1P06400 MTND6P5-201ENST00000448266 512 ntBASIC6.04□□□□□ -1.44
RB1P06400 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.04□□□□□ -1.44
RB1P06400 RPS23P2-201ENST00000463671 415 ntBASIC6.04□□□□□ -1.44
RB1P06400 CR383656.1-201ENST00000484916 377 ntBASIC6.04□□□□□ -1.44
RB1P06400 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.04□□□□□ -1.44
RB1P06400 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RB1P06400 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.04□□□□□ -1.44
RB1P06400 AC117525.1-201ENST00000515228 503 ntBASIC6.04□□□□□ -1.44
RB1P06400 RN7SKP99-201ENST00000517028 307 ntBASIC6.04□□□□□ -1.44
RB1P06400 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.04□□□□□ -1.44
RB1P06400 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.04□□□□□ -1.44
RB1P06400 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.04□□□□□ -1.44
RB1P06400 OR4A40P-201ENST00000533878 948 ntBASIC6.04□□□□□ -1.44
RB1P06400 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.04□□□□□ -1.44
RB1P06400 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.04□□□□□ -1.44
RB1P06400 AP002884.5-201ENST00000595053 1132 ntBASIC6.04□□□□□ -1.44
RB1P06400 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.04□□□□□ -1.44
RB1P06400 AC000068.2-201ENST00000608816 460 ntBASIC6.04□□□□□ -1.44
RB1P06400 AL138960.1-201ENST00000613838 513 ntBASIC6.04□□□□□ -1.44
RB1P06400 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.04□□□□□ -1.44
RB1P06400 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
RB1P06400 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.04□□□□□ -1.44
RB1P06400 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.04□□□□□ -1.44
RB1P06400 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RB1P06400 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RB1P06400 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.04□□□□□ -1.44
RB1P06400 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RB1P06400 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
RB1P06400 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.03□□□□□ -1.44
RB1P06400 AC112255.1-201ENST00000624070 2493 ntBASIC6.03□□□□□ -1.44
RB1P06400 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.03□□□□□ -1.44
RB1P06400 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RB1P06400 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 AC068769.1-201ENST00000474767 2426 ntBASIC6.03□□□□□ -1.44
RB1P06400 RPL23P2-201ENST00000320371 421 ntBASIC6.03□□□□□ -1.44
RB1P06400 RN7SKP6-201ENST00000364795 319 ntBASIC6.03□□□□□ -1.44
RB1P06400 MIR7-1-201ENST00000384871 110 ntBASIC6.03□□□□□ -1.44
RB1P06400 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RB1P06400 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.03□□□□□ -1.44
RB1P06400 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.03□□□□□ -1.44
RB1P06400 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.03□□□□□ -1.44
RB1P06400 AL731534.1-201ENST00000434711 269 ntBASIC6.03□□□□□ -1.44
RB1P06400 AC096775.1-201ENST00000437724 448 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms