Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SPTA1P02549 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.01□□□□□ -1.61
SPTA1P02549 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SPTA1P02549 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 SNORA70.4-201ENST00000365509 134 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 TRY2P-201ENST00000448860 689 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SPTA1P02549 RN7SL591P-201ENST00000496150 292 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 AC021006.3-201ENST00000530771 192 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 AC134349.2-201ENST00000535136 910 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SPTA1P02549 AC103792.1-201ENST00000603591 919 ntBASIC5.01□□□□□ -1.61
SPTA1P02549 AC093908.1-201ENST00000623125 8092 ntBASIC5□□□□□ -1.61
SPTA1P02549 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
SPTA1P02549 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SPTA1P02549 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5□□□□□ -1.61
SPTA1P02549 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5□□□□□ -1.61
SPTA1P02549 AL359922.2-201ENST00000581788 3017 ntBASIC5□□□□□ -1.61
SPTA1P02549 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SPTA1P02549 RNA5SP487-201ENST00000410186 122 ntBASIC5□□□□□ -1.61
SPTA1P02549 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5□□□□□ -1.61
SPTA1P02549 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5□□□□□ -1.61
SPTA1P02549 PPM1AP1-201ENST00000502740 1135 ntBASIC5□□□□□ -1.61
SPTA1P02549 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 IGKV2D-10-201ENST00000520194 281 ntBASIC5□□□□□ -1.61
SPTA1P02549 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5□□□□□ -1.61
SPTA1P02549 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SPTA1P02549 AC007494.1-201ENST00000562293 760 ntBASIC5□□□□□ -1.61
SPTA1P02549 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5□□□□□ -1.61
SPTA1P02549 AC090607.5-201ENST00000615692 224 ntBASIC5□□□□□ -1.61
SPTA1P02549 AP002505.2-201ENST00000623585 696 ntBASIC5□□□□□ -1.61
SPTA1P02549 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SPTA1P02549 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC5□□□□□ -1.61
SPTA1P02549 AF131215.2-201ENST00000531549 1710 ntBASIC5□□□□□ -1.61
SPTA1P02549 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5□□□□□ -1.61
SPTA1P02549 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SPTA1P02549 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SPTA1P02549 RNA5SP171-201ENST00000391071 115 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 AC025750.1-201ENST00000399891 379 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.99□□□□□ -1.61
SPTA1P02549 GSTM5P1-201ENST00000434751 660 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.99□□□□□ -1.61
SPTA1P02549 NDUFA12P1-201ENST00000455914 406 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 RPL7P32-201ENST00000457119 744 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 AC090058.1-201ENST00000498788 435 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 GTF2F2P1-201ENST00000511083 675 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 AC074255.1-201ENST00000511259 501 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 RN7SKP21-201ENST00000516503 220 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 AC090424.1-201ENST00000535243 736 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.99□□□□□ -1.61
SPTA1P02549 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
SPTA1P02549 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.99□□□□□ -1.61
SPTA1P02549 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 AL391261.1-201ENST00000555712 1479 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 RNU1-146P-201ENST00000364015 165 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SPTA1P02549 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 MED28P3-201ENST00000444288 531 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.99□□□□□ -1.61
SPTA1P02549 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.99□□□□□ -1.61
SPTA1P02549 AURKAPS2-201ENST00000454983 333 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 DUTP1-201ENST00000493631 470 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.99□□□□□ -1.61
SPTA1P02549 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.99□□□□□ -1.61
SPTA1P02549 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.99□□□□□ -1.61
SPTA1P02549 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.99□□□□□ -1.61
SPTA1P02549 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.99□□□□□ -1.61
SPTA1P02549 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.99□□□□□ -1.61
SPTA1P02549 MIR4270-201ENST00000581799 70 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 AC006115.2-201ENST00000596823 202 ntBASIC4.99□□□□□ -1.61
SPTA1P02549 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SPTA1P02549 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.99□□□□□ -1.61
SPTA1P02549 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms