Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.28□□□□□ -1.4
COL2A1P02458 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.28□□□□□ -1.4
COL2A1P02458 AC084824.2-201ENST00000548906 345 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.28□□□□□ -1.4
COL2A1P02458 AC008814.1-201ENST00000603797 406 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 AP005131.7-201ENST00000610087 611 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 AC244107.2-201ENST00000611773 76 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 MIR7641-1-201ENST00000627518 61 ntBASIC6.28□□□□□ -1.4
COL2A1P02458 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
COL2A1P02458 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL2A1P02458 AL355488.2-201ENST00000609909 2850 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL2A1P02458 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL2A1P02458 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL2A1P02458 AC011933.2-201ENST00000578539 2790 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL2A1P02458 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.27□□□□□ -1.41
COL2A1P02458 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.27□□□□□ -1.41
COL2A1P02458 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL2A1P02458 MAPK10-304ENST00000641341 3984 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AL033543.1-201ENST00000623440 13454 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL2A1P02458 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL2A1P02458 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL2A1P02458 AL035419.1-201ENST00000397037 564 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AL078599.1-201ENST00000402075 293 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 PPIAP9-201ENST00000403866 498 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 MTND4LP17-201ENST00000414607 293 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 RPL23AP18-201ENST00000416139 468 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AL360081.1-201ENST00000428299 555 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AC073465.2-201ENST00000440938 498 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AC073072.2-201ENST00000447425 348 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AC092647.2-201ENST00000452998 253 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AC009127.1-201ENST00000467090 155 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 STRADBP1-201ENST00000478954 1281 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 RPL37AP8-201ENST00000494116 276 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.27□□□□□ -1.41
COL2A1P02458 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.27□□□□□ -1.41
COL2A1P02458 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.27□□□□□ -1.41
COL2A1P02458 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.27□□□□□ -1.41
COL2A1P02458 AC234771.5-201ENST00000600161 514 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AC009597.2-201ENST00000604659 592 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AC087783.2-201ENST00000605070 562 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.27□□□□□ -1.41
COL2A1P02458 AL139124.1-201ENST00000609123 421 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 AP003400.3-201ENST00000624904 346 ntBASIC6.27□□□□□ -1.41
COL2A1P02458 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.27□□□□□ -1.41
COL2A1P02458 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 CASC19-281ENST00000642118 1554 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL2A1P02458 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL2A1P02458 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.26□□□□□ -1.41
COL2A1P02458 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
COL2A1P02458 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL2A1P02458 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 THAP12P4-201ENST00000528321 2266 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.26□□□□□ -1.41
COL2A1P02458 AL590399.2-201ENST00000427536 309 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 AL049745.1-201ENST00000433953 286 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 KNOP1P3-201ENST00000446933 426 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 AC002075.1-201ENST00000457396 676 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 RN7SL738P-201ENST00000470264 297 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.26□□□□□ -1.41
COL2A1P02458 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.26□□□□□ -1.41
COL2A1P02458 OR4A6P-201ENST00000534364 970 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.26□□□□□ -1.41
COL2A1P02458 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.26□□□□□ -1.41
COL2A1P02458 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.26□□□□□ -1.41
COL2A1P02458 AL356608.1-201ENST00000610034 820 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.26□□□□□ -1.41
COL2A1P02458 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
COL2A1P02458 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL2A1P02458 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.26□□□□□ -1.41
COL2A1P02458 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL2A1P02458 AC079777.1-201ENST00000623836 1953 ntBASIC6.26□□□□□ -1.41
COL2A1P02458 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL2A1P02458 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.25□□□□□ -1.41
COL2A1P02458 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL2A1P02458 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.25□□□□□ -1.41
COL2A1P02458 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL2A1P02458 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL2A1P02458 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
COL2A1P02458 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
COL2A1P02458 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL2A1P02458 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
COL2A1P02458 AP004289.1-201ENST00000436307 2205 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms