Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC211486.3-201ENST00000412694 621 ntBASIC6.44□□□□□ -1.38
COL1A1P02452 AL360081.1-201ENST00000428299 555 ntBASIC6.44□□□□□ -1.38
COL1A1P02452 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.44□□□□□ -1.38
COL1A1P02452 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.44□□□□□ -1.38
COL1A1P02452 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.44□□□□□ -1.38
COL1A1P02452 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.44□□□□□ -1.38
COL1A1P02452 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL1A1P02452 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL1A1P02452 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 AC008814.1-201ENST00000603797 406 ntBASIC6.44□□□□□ -1.38
COL1A1P02452 AP005432.2-201ENST00000608162 586 ntBASIC6.44□□□□□ -1.38
COL1A1P02452 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL1A1P02452 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.44□□□□□ -1.38
COL1A1P02452 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL1A1P02452 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.44□□□□□ -1.38
COL1A1P02452 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 AC079097.1-201ENST00000512187 1399 ntBASIC6.44□□□□□ -1.38
COL1A1P02452 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL1A1P02452 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.44□□□□□ -1.38
COL1A1P02452 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL1A1P02452 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL1A1P02452 SNURFL-201ENST00000309296 343 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 RNVU1-6-201ENST00000364688 164 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 U3.28-201ENST00000391249 210 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 CHMP1B2P-201ENST00000399581 597 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 DDX39BP1-205ENST00000422507 192 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL1A1P02452 AC073465.2-201ENST00000440938 498 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 AC009127.1-201ENST00000467090 155 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 CEACAMP10-202ENST00000495431 496 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.43□□□□□ -1.38
COL1A1P02452 RN7SKP147-201ENST00000517154 244 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 AP002373.2-201ENST00000541631 1060 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.43□□□□□ -1.38
COL1A1P02452 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 MIR3934-201ENST00000579806 107 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.43□□□□□ -1.38
COL1A1P02452 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.43□□□□□ -1.38
COL1A1P02452 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.43□□□□□ -1.38
COL1A1P02452 AC092747.4-201ENST00000620519 1861 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 INTS6P1-201ENST00000504674 2530 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL1A1P02452 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
COL1A1P02452 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.43□□□□□ -1.38
COL1A1P02452 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL1A1P02452 AC026951.1-201ENST00000559530 2459 ntBASIC6.43□□□□□ -1.38
COL1A1P02452 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL1A1P02452 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.42□□□□□ -1.38
COL1A1P02452 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL1A1P02452 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
COL1A1P02452 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.42□□□□□ -1.38
COL1A1P02452 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
COL1A1P02452 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.42□□□□□ -1.38
COL1A1P02452 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 AC068138.1-201ENST00000412635 217 ntBASIC6.42□□□□□ -1.38
COL1A1P02452 AC021876.1-201ENST00000425959 359 ntBASIC6.42□□□□□ -1.38
COL1A1P02452 AC104837.2-201ENST00000427236 424 ntBASIC6.42□□□□□ -1.38
COL1A1P02452 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.42□□□□□ -1.38
COL1A1P02452 AL606490.8-201ENST00000441624 319 ntBASIC6.42□□□□□ -1.38
COL1A1P02452 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.42□□□□□ -1.38
COL1A1P02452 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.42□□□□□ -1.38
COL1A1P02452 AC137768.1-201ENST00000549998 553 ntBASIC6.42□□□□□ -1.38
COL1A1P02452 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.42□□□□□ -1.38
COL1A1P02452 AC063949.1-201ENST00000552900 865 ntBASIC6.42□□□□□ -1.38
COL1A1P02452 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.42□□□□□ -1.38
COL1A1P02452 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.42□□□□□ -1.38
COL1A1P02452 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.42□□□□□ -1.38
COL1A1P02452 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.42□□□□□ -1.38
COL1A1P02452 AP000550.3-201ENST00000637734 379 ntBASIC6.42□□□□□ -1.38
COL1A1P02452 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.42□□□□□ -1.38
COL1A1P02452 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
COL1A1P02452 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
COL1A1P02452 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 AC079777.1-201ENST00000623836 1953 ntBASIC6.42□□□□□ -1.38
COL1A1P02452 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL1A1P02452 SNX18P3-202ENST00000565670 1750 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 RPS3AP53-201ENST00000454716 778 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.41□□□□□ -1.38
COL1A1P02452 RPL37AP8-201ENST00000494116 276 ntBASIC6.41□□□□□ -1.38
COL1A1P02452 AC105233.1-201ENST00000498840 781 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms