Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 Z83820.1-201ENST00000456978 1499 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 RN7SKP15-201ENST00000364742 309 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 RN7SKP28-201ENST00000364770 305 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 PEX12P1-201ENST00000400284 1048 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AC079809.1-201ENST00000415468 276 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 AL136231.1-201ENST00000429407 730 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN9O95484 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN9O95484 AC016772.1-201ENST00000444170 1261 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 EEF1B2P6-201ENST00000445713 673 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 CBX1P2-201ENST00000453841 458 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 AC094085.1-201ENST00000468914 584 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 MTND6P2-201ENST00000512226 524 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 HMGN1P9-201ENST00000515212 298 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN9O95484 OR11H3P-201ENST00000554547 982 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AL049872.1-201ENST00000556323 322 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN9O95484 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN9O95484 AC027216.1-201ENST00000577726 685 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN9O95484 AC108738.1-201ENST00000603703 237 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AC100767.2-201ENST00000604840 693 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 AC135068.5-201ENST00000624197 983 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 AC007683.2-201ENST00000624681 714 ntBASIC5.27□□□□□ -1.57
CLDN9O95484 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN9O95484 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN9O95484 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN9O95484 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN9O95484 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN9O95484 AL929601.4-201ENST00000613011 1341 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN9O95484 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN9O95484 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN9O95484 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN9O95484 RN7SKP69-201ENST00000365390 305 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN9O95484 RNA5SP241-201ENST00000391326 114 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN9O95484 BMS1P17-202ENST00000416720 316 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.26□□□□□ -1.57
CLDN9O95484 AC017019.1-201ENST00000426129 261 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN9O95484 RPL7AP49-201ENST00000429522 581 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN9O95484 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN9O95484 RPL12P17-201ENST00000432393 498 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN9O95484 AL591438.1-201ENST00000433508 581 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 FMO7P-201ENST00000436045 768 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN9O95484 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN9O95484 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.26□□□□□ -1.57
CLDN9O95484 AC104849.1-201ENST00000462623 405 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLDN9O95484 IGBP1P4-201ENST00000503202 879 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN9O95484 CDC42P3-201ENST00000518493 633 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.26□□□□□ -1.57
CLDN9O95484 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.26□□□□□ -1.57
CLDN9O95484 OR8G3P-201ENST00000533406 921 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLDN9O95484 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN9O95484 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN9O95484 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN9O95484 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN9O95484 AP000769.2-201ENST00000602344 396 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN9O95484 RNU6-84P-201ENST00000607737 102 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 AL118522.2-201ENST00000616045 615 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 MIR6729-201ENST00000618194 65 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN9O95484 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN9O95484 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN9O95484 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms