Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SSX4O60224 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX4O60224 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX4O60224 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 AC010503.3-201ENST00000594355 540 ntBASIC5.27□□□□□ -1.57
SSX4O60224 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 AC015712.7-201ENST00000615211 635 ntBASIC5.27□□□□□ -1.57
SSX4O60224 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 AC019080.5-201ENST00000624891 757 ntBASIC5.27□□□□□ -1.57
SSX4O60224 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.26□□□□□ -1.57
SSX4O60224 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.26□□□□□ -1.57
SSX4O60224 AC008627.1-201ENST00000517511 1704 ntBASIC5.26□□□□□ -1.57
SSX4O60224 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSX4O60224 SNORA21-201ENST00000362423 132 ntBASIC5.26□□□□□ -1.57
SSX4O60224 SNORA51.1-201ENST00000363243 140 ntBASIC5.26□□□□□ -1.57
SSX4O60224 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSX4O60224 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX4O60224 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSX4O60224 SNORA17A-201ENST00000391185 133 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX4O60224 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 AC073464.3-201ENST00000422564 712 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX4O60224 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX4O60224 MGAT2P2-201ENST00000427194 797 ntBASIC5.26□□□□□ -1.57
SSX4O60224 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 AL606490.7-201ENST00000433136 191 ntBASIC5.26□□□□□ -1.57
SSX4O60224 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX4O60224 AC023271.1-201ENST00000445936 1090 ntBASIC5.26□□□□□ -1.57
SSX4O60224 VN1R48P-201ENST00000448149 1036 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX4O60224 CST12P-201ENST00000457644 362 ntBASIC5.26□□□□□ -1.57
SSX4O60224 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.26□□□□□ -1.57
SSX4O60224 PPIAP19-201ENST00000486414 492 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX4O60224 PSMA2P2-201ENST00000504319 686 ntBASIC5.26□□□□□ -1.57
SSX4O60224 CR383658.1-201ENST00000514609 734 ntBASIC5.26□□□□□ -1.57
SSX4O60224 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX4O60224 SNORD46.2-201ENST00000516021 102 ntBASIC5.26□□□□□ -1.57
SSX4O60224 SCARNA21.2-201ENST00000516600 166 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AC022826.1-201ENST00000519383 805 ntBASIC5.26□□□□□ -1.57
SSX4O60224 OR6M2P-201ENST00000529831 871 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.26□□□□□ -1.57
SSX4O60224 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX4O60224 CKS1BP1-201ENST00000555221 240 ntBASIC5.26□□□□□ -1.57
SSX4O60224 RPA2P1-201ENST00000556557 721 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX4O60224 MIR4660-201ENST00000583549 74 ntBASIC5.26□□□□□ -1.57
SSX4O60224 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.26□□□□□ -1.57
SSX4O60224 AC010487.1-201ENST00000594408 1172 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX4O60224 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 AC068768.2-201ENST00000602352 343 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AL109620.1-201ENST00000618738 1197 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AC103798.2-201ENST00000624292 632 ntBASIC5.26□□□□□ -1.57
SSX4O60224 SNORA17.5-201ENST00000630429 132 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AC103703.1-201ENST00000634783 663 ntBASIC5.26□□□□□ -1.57
SSX4O60224 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SSX4O60224 OR7A1P-202ENST00000641542 1158 ntBASIC5.26□□□□□ -1.57
SSX4O60224 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX4O60224 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.26□□□□□ -1.57
SSX4O60224 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.26□□□□□ -1.57
SSX4O60224 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX4O60224 AC068870.3-201ENST00000625077 2536 ntBASIC5.26□□□□□ -1.57
SSX4O60224 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX4O60224 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSX4O60224 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
SSX4O60224 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX4O60224 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX4O60224 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX4O60224 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX4O60224 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SSX4O60224 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX4O60224 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX4O60224 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms