Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RPS23P2-201ENST00000463671 415 ntBASIC9.29□□□□□ -0.92
CUX2O14529 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC9.29□□□□□ -0.92
CUX2O14529 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC9.29□□□□□ -0.92
CUX2O14529 AC060766.1-201ENST00000590824 627 ntBASIC9.29□□□□□ -0.92
CUX2O14529 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC9.29□□□□□ -0.92
CUX2O14529 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC9.29□□□□□ -0.92
CUX2O14529 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CUX2O14529 AP004607.3-201ENST00000530354 3915 ntBASIC9.29□□□□□ -0.92
CUX2O14529 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
CUX2O14529 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC9.29□□□□□ -0.92
CUX2O14529 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.29□□□□□ -0.92
CUX2O14529 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CUX2O14529 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CUX2O14529 RN7SKP145-201ENST00000363291 303 ntBASIC9.28□□□□□ -0.92
CUX2O14529 RNU1-64P-201ENST00000365443 163 ntBASIC9.28□□□□□ -0.92
CUX2O14529 CDC123-202ENST00000378900 933 ntTSL 5 BASIC9.28□□□□□ -0.92
CUX2O14529 RPL32P23-201ENST00000397237 405 ntBASIC9.28□□□□□ -0.92
CUX2O14529 SNORA11.1-201ENST00000408133 129 ntBASIC9.28□□□□□ -0.92
CUX2O14529 RPL31-204ENST00000409038 817 ntTSL 2 BASIC9.28□□□□□ -0.92
CUX2O14529 AC116036.1-201ENST00000412199 367 ntBASIC9.28□□□□□ -0.92
CUX2O14529 ATP6V1G1P7-201ENST00000415853 349 ntBASIC9.28□□□□□ -0.92
CUX2O14529 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC9.28□□□□□ -0.92
CUX2O14529 NDUFB4P12-201ENST00000513465 390 ntBASIC9.28□□□□□ -0.92
CUX2O14529 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC9.28□□□□□ -0.92
CUX2O14529 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 AC009951.1-201ENST00000623674 2614 ntBASIC9.28□□□□□ -0.92
CUX2O14529 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC9.28□□□□□ -0.92
CUX2O14529 AC068733.2-201ENST00000605434 1418 ntBASIC9.28□□□□□ -0.92
CUX2O14529 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CUX2O14529 RNA5SP113-201ENST00000410486 84 ntBASIC9.28□□□□□ -0.92
CUX2O14529 RN7SKP100-201ENST00000411258 284 ntBASIC9.28□□□□□ -0.92
CUX2O14529 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC9.28□□□□□ -0.92
CUX2O14529 HCG14-201ENST00000444986 413 ntTSL 2 BASIC9.28□□□□□ -0.92
CUX2O14529 EEF1A1P1-201ENST00000447052 739 ntBASIC9.28□□□□□ -0.92
CUX2O14529 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC9.28□□□□□ -0.92
CUX2O14529 AC139697.1-201ENST00000548429 745 ntBASIC9.28□□□□□ -0.92
CUX2O14529 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC9.28□□□□□ -0.92
CUX2O14529 AC053481.3-201ENST00000577881 843 ntBASIC9.28□□□□□ -0.92
CUX2O14529 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
CUX2O14529 AC022819.1-201ENST00000563495 3910 ntBASIC9.27□□□□□ -0.92
CUX2O14529 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC9.27□□□□□ -0.93
CUX2O14529 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CUX2O14529 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC9.27□□□□□ -0.93
CUX2O14529 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CUX2O14529 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC9.27□□□□□ -0.93
CUX2O14529 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC9.27□□□□□ -0.93
CUX2O14529 AC097063.1-201ENST00000426714 1797 ntBASIC9.27□□□□□ -0.93
CUX2O14529 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC9.27□□□□□ -0.93
CUX2O14529 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CUX2O14529 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CUX2O14529 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CUX2O14529 SNORA70H-201ENST00000383910 135 ntBASIC9.27□□□□□ -0.93
CUX2O14529 RNU6-761P-201ENST00000384148 107 ntBASIC9.27□□□□□ -0.93
CUX2O14529 SNORA70J-201ENST00000384182 135 ntBASIC9.27□□□□□ -0.93
CUX2O14529 AC025750.1-201ENST00000399891 379 ntBASIC9.27□□□□□ -0.93
CUX2O14529 TXNP2-201ENST00000443918 295 ntBASIC9.27□□□□□ -0.93
CUX2O14529 GAPDHP25-201ENST00000447061 1001 ntBASIC9.27□□□□□ -0.93
CUX2O14529 AP002812.1-201ENST00000495378 474 ntBASIC9.27□□□□□ -0.93
CUX2O14529 AC023424.1-201ENST00000496058 459 ntBASIC9.27□□□□□ -0.93
CUX2O14529 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC9.27□□□□□ -0.93
CUX2O14529 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC9.27□□□□□ -0.93
CUX2O14529 AL121594.2-201ENST00000541658 472 ntBASIC9.27□□□□□ -0.93
CUX2O14529 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC9.27□□□□□ -0.93
CUX2O14529 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC9.27□□□□□ -0.93
CUX2O14529 MIR6716-201ENST00000613413 80 ntBASIC9.27□□□□□ -0.93
CUX2O14529 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CUX2O14529 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
CUX2O14529 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
CUX2O14529 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
CUX2O14529 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CUX2O14529 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CUX2O14529 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CUX2O14529 GPS2P1-201ENST00000411761 986 ntBASIC9.26□□□□□ -0.93
CUX2O14529 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC9.26□□□□□ -0.93
CUX2O14529 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC9.26□□□□□ -0.93
CUX2O14529 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CUX2O14529 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CUX2O14529 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC9.26□□□□□ -0.93
CUX2O14529 RNA5SP373-201ENST00000517271 95 ntBASIC9.26□□□□□ -0.93
CUX2O14529 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC9.26□□□□□ -0.93
CUX2O14529 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC9.26□□□□□ -0.93
CUX2O14529 KARSP3-201ENST00000571212 1504 ntBASIC9.26□□□□□ -0.93
CUX2O14529 AL513327.3-201ENST00000602618 469 ntBASIC9.26□□□□□ -0.93
CUX2O14529 AC009597.2-201ENST00000604659 592 ntBASIC9.26□□□□□ -0.93
CUX2O14529 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC9.26□□□□□ -0.93
CUX2O14529 AC015660.5-201ENST00000623238 564 ntBASIC9.26□□□□□ -0.93
CUX2O14529 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CUX2O14529 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC9.25□□□□□ -0.93
CUX2O14529 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CUX2O14529 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CUX2O14529 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.25□□□□□ -0.93
CUX2O14529 NBPF8-201ENST00000583271 5330 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms