Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM1O00151 CASC19-255ENST00000641733 1385 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 AC068870.1-201ENST00000563737 2455 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 AC006206.1-201ENST00000544842 3387 ntBASIC5.36□□□□□ -1.55
PDLIM1O00151 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM1O00151 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM1O00151 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PDLIM1O00151 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM1O00151 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM1O00151 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM1O00151 RNA5SP326-201ENST00000363209 110 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 OR7E156P-201ENST00000400303 464 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 AL096711.1-201ENST00000404780 554 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM1O00151 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM1O00151 CYCSP10-201ENST00000417973 294 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 VN1R3-201ENST00000418822 919 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 RPS4XP5-201ENST00000419038 768 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM1O00151 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM1O00151 KCTD9P1-201ENST00000430462 1167 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AC110602.1-201ENST00000437414 318 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AC015983.1-201ENST00000441577 373 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 LINC02210-201ENST00000444561 288 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 MTND4LP12-201ENST00000448237 295 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AC245028.2-201ENST00000458673 253 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 AP002371.1-201ENST00000463604 433 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 AC023194.2-201ENST00000465398 406 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM1O00151 RPS7P6-201ENST00000485777 579 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 OR2A3P-201ENST00000493774 953 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM1O00151 OR4A17P-201ENST00000526032 904 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDLIM1O00151 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AP005119.1-201ENST00000580956 292 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM1O00151 MIR6071-201ENST00000616741 78 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM1O00151 MIR1910-201ENST00000636955 80 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AL672167.1-204ENST00000641875 3017 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM1O00151 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM1O00151 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM1O00151 AC114947.2-201ENST00000565748 2125 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 DDX18P6-201ENST00000450119 1997 ntBASIC5.35□□□□□ -1.55
PDLIM1O00151 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.34□□□□□ -1.55
PDLIM1O00151 MTCO1P28-201ENST00000574177 1528 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.34□□□□□ -1.55
PDLIM1O00151 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 AC233968.1-201ENST00000611212 1300 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PDLIM1O00151 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PDLIM1O00151 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM1O00151 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 NDUFB4P8-201ENST00000435351 367 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 AL445928.1-201ENST00000435545 222 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM1O00151 MTND6P5-201ENST00000448266 512 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 CFL1P4-201ENST00000451536 498 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 SNORD125-201ENST00000459538 96 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 AC104849.1-201ENST00000462623 405 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 AL157777.1-201ENST00000468100 304 ntBASIC5.34□□□□□ -1.55
PDLIM1O00151 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM1O00151 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM1O00151 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.34□□□□□ -1.55
PDLIM1O00151 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms