Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC087565.3-202ENST00000642085 1603 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC083843.2-201ENST00000568248 6253 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AL359955.1-201ENST00000455242 3275 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 RNA5SP132-201ENST00000364725 118 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AL121977.1-201ENST00000401636 979 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 SNORA11B-201ENST00000408175 129 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 TRIM60P13-201ENST00000432350 1283 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC114878.1-201ENST00000441166 358 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 CYCSP51-201ENST00000443545 318 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC005297.1-201ENST00000444765 862 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 RN7SL72P-201ENST00000460697 269 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC006539.1-201ENST00000481419 501 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 DUTP7-201ENST00000507982 486 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC021678.3-201ENST00000517893 476 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AL159169.2-201ENST00000610061 1269 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC079395.2-201ENST00000610982 737 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 OR51C1P-202ENST00000641159 1444 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC117409.1-201ENST00000470499 1310 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC007842.1-201ENST00000597336 2039 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 YES1P1-201ENST00000418510 1628 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC018809.2-201ENST00000602436 3823 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC003985.2-201ENST00000562268 1669 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AL672167.2-201ENST00000377164 879 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 NPM1P26-201ENST00000426339 738 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 CRIP1P1-201ENST00000427567 185 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 MTCO1P57-201ENST00000432182 261 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 FMO7P-201ENST00000436045 768 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AL606490.8-201ENST00000441624 319 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 RPL31P20-201ENST00000449593 360 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 FRG2FP-204ENST00000453982 852 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 MTND6P32-201ENST00000457611 483 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 SIAH1P1-201ENST00000479411 923 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC009120.1-201ENST00000493458 473 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 RNU6-319P-201ENST00000516025 108 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 IGKV2-19-201ENST00000518132 283 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC078899.1-201ENST00000521432 1185 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 AC027026.1-201ENST00000532323 742 ntBASIC5.19□□□□□ -1.58
NPIPA3F8WFD2 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms