Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 HMGB1P13-201ENST00000406019 642 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 ATF1P1-201ENST00000406040 927 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RANP6-201ENST00000413691 644 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 NENFP1-201ENST00000419476 466 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 EIF4A1P1-201ENST00000420241 934 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 PNRC2P1-201ENST00000423940 420 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 USP9YP11-201ENST00000427537 717 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RPL5P25-201ENST00000441148 775 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AL845321.1-201ENST00000444603 348 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 CCNJP1-201ENST00000450600 1149 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 Z95152.1-201ENST00000453556 656 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC103563.5-201ENST00000455643 364 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RPL6P9-201ENST00000466502 859 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RN7SKP196-201ENST00000516267 345 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 FTH1P11-201ENST00000517577 551 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 OR4H6P-201ENST00000563771 921 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC010287.1-201ENST00000566916 357 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC090616.1-201ENST00000583895 447 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RPS4XP21-201ENST00000603814 750 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC019257.2-201ENST00000605539 497 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC241377.1-201ENST00000619797 406 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC139792.2-201ENST00000624218 587 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC135068.11-201ENST00000636378 921 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC012078.1-201ENST00000405035 1646 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 RNU6-31P-201ENST00000384388 108 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 RPL26P37-201ENST00000411983 438 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 XKRYP4-201ENST00000414395 483 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 MRPS21P5-201ENST00000417885 231 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AL139184.1-202ENST00000422303 222 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC000041.1-201ENST00000439655 175 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 XKRYP5-201ENST00000449659 483 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 GAPDHP14-201ENST00000450472 937 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 OSTCP1-201ENST00000455507 450 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 RN7SL72P-201ENST00000460697 269 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 RNU6-1028P-201ENST00000517164 93 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 MRPS36P3-201ENST00000519284 130 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AP003717.3-201ENST00000544832 1180 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AGGF1P6-201ENST00000569213 976 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC027796.1-201ENST00000575593 512 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC146944.4-201ENST00000602697 718 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms