Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHGA6Q9Y5G7 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.15□□□□□ -1.43
PCDHGA6Q9Y5G7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHGA6Q9Y5G7 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.15□□□□□ -1.43
PCDHGA6Q9Y5G7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.15□□□□□ -1.43
PCDHGA6Q9Y5G7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHGA6Q9Y5G7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
PCDHGA6Q9Y5G7 VPS35P1-201ENST00000563400 1518 ntBASIC6.15□□□□□ -1.43
PCDHGA6Q9Y5G7 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC110373.1-201ENST00000505994 3505 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC068769.1-201ENST00000474767 2426 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 RPL11P4-201ENST00000332269 436 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 RN7SKP269-201ENST00000365545 319 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 MIR323B-201ENST00000385269 82 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AL035419.1-201ENST00000397037 564 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC003045.1-201ENST00000398779 713 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 HMGB3P7-201ENST00000400214 611 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC092638.1-201ENST00000411966 1275 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AL035422.1-201ENST00000414193 397 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AL449283.1-202ENST00000418249 604 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC007568.1-201ENST00000422912 471 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC097721.1-201ENST00000427150 1253 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC073052.1-201ENST00000440417 714 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 Z77249.1-201ENST00000444622 1175 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 HMGN1P2-201ENST00000445197 310 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 MTCYBP11-201ENST00000447254 1109 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 HMGB1P7-201ENST00000450921 612 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 OR2AF1P-201ENST00000454899 889 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC005351.1-201ENST00000511152 786 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC112673.1-201ENST00000513168 575 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC244502.2-201ENST00000543361 851 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC008083.2-201ENST00000546707 476 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC008055.1-201ENST00000547032 609 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC025260.1-201ENST00000548858 430 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 CCDC58P3-201ENST00000590792 430 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 DYNLL1P1-201ENST00000595442 269 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC124916.2-201ENST00000604416 224 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC006386.1-201ENST00000619436 415 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AP002782.1-201ENST00000623107 614 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC018692.2-201ENST00000624130 348 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 OR1S1-201ENST00000624470 978 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 AC005225.5-201ENST00000623547 2225 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 HSPD1P8-201ENST00000400121 1658 ntBASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA6Q9Y5G7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 AC140479.2-201ENST00000421567 3130 ntBASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA6Q9Y5G7 RNU6-224P-201ENST00000384055 107 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms