Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.65□□□□□ -1.34
CTNNA3Q9UI47 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
CTNNA3Q9UI47 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CTNNA3Q9UI47 PPATP2-201ENST00000605635 508 ntBASIC6.65□□□□□ -1.34
CTNNA3Q9UI47 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.65□□□□□ -1.34
CTNNA3Q9UI47 AL021707.7-201ENST00000607991 416 ntBASIC6.65□□□□□ -1.34
CTNNA3Q9UI47 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.65□□□□□ -1.34
CTNNA3Q9UI47 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.35
CTNNA3Q9UI47 AC004656.1-201ENST00000568479 4951 ntBASIC6.65□□□□□ -1.35
CTNNA3Q9UI47 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.65□□□□□ -1.35
CTNNA3Q9UI47 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CTNNA3Q9UI47 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CTNNA3Q9UI47 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC068870.1-201ENST00000563737 2455 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 SNORA74A-201ENST00000364089 198 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 RN7SKP6-201ENST00000364795 319 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 IGBP1P3-201ENST00000447449 1000 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 RN7SL72P-201ENST00000460697 269 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 RN7SL610P-201ENST00000463845 291 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC008410.1-201ENST00000483777 339 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC074087.1-201ENST00000512059 724 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AL589674.2-201ENST00000604304 337 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC092944.2-201ENST00000605443 889 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AP000864.1-201ENST00000609424 650 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC132825.8-201ENST00000640783 297 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 MAPK10-328ENST00000641553 4009 ntBASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CTNNA3Q9UI47 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 AC092681.1-201ENST00000297369 291 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 RN7SKP160-201ENST00000363804 340 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 RNU4-2-201ENST00000365668 141 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 TNPO1P1-201ENST00000423641 1138 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 RPL7P56-201ENST00000429441 717 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 NPM1P18-201ENST00000434232 732 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 FMO7P-201ENST00000436045 768 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 VDAC2P4-201ENST00000452925 711 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 RPS23P1-201ENST00000491662 432 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 EIF3LP3-201ENST00000495197 822 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 AP001284.1-201ENST00000528393 2118 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 AL691477.1-201ENST00000624398 162 ntBASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CTNNA3Q9UI47 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 CDY11P-201ENST00000447168 1651 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms