Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 AC011225.1-201ENST00000457751 369 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 AC108693.1-201ENST00000496068 432 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 RNA5SP116-201ENST00000516132 98 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 NRBF2P4-201ENST00000520874 850 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 MRPS21P7-201ENST00000566937 238 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 AC233266.2-201ENST00000567067 528 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 OOSP1P2-201ENST00000579644 351 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 ZNF92P2-201ENST00000600543 1059 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 AC012213.4-201ENST00000606457 354 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 AL391834.2-201ENST00000609982 546 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 AL035661.1-201ENST00000620459 1144 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 CR788268.1-201ENST00000603931 1809 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL20A1Q9P218 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
COL20A1Q9P218 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.46□□□□□ -1.37
COL20A1Q9P218 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 RNA5SP91-201ENST00000390902 119 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 NPM1P4-201ENST00000414095 812 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 MARK2P12-201ENST00000420129 585 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 CFL1P1-202ENST00000432948 411 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AL450996.1-201ENST00000445574 1202 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 VDAC2P4-201ENST00000452925 711 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 LDHBP2-201ENST00000456969 1005 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 SIAH1P1-201ENST00000479411 923 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 RN7SL547P-201ENST00000490793 290 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 MTCO2P9-201ENST00000503214 694 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC103833.1-201ENST00000517442 172 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 OSBPL9P3-201ENST00000534523 595 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AL121594.2-201ENST00000541658 472 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 ABI1P1-201ENST00000603375 1120 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AL138955.1-201ENST00000622881 1040 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 AC235565.1-201ENST00000456962 1325 ntBASIC6.46□□□□□ -1.38
COL20A1Q9P218 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COL20A1Q9P218 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL20A1Q9P218 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms