Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC093827.1-201ENST00000480094 861 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 MYL12BP2-201ENST00000503948 512 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 ENPP7P11-201ENST00000505915 627 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC138409.2-202ENST00000507274 458 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC009852.2-201ENST00000567898 485 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC129778.1-202ENST00000623812 261 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AL591379.1-207ENST00000635982 261 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC008691.1-209ENST00000642094 814 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 TRIM51GP-201ENST00000534741 1350 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC093591.2-201ENST00000565254 3843 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 MIR375-201ENST00000362103 64 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 RNU1-65P-201ENST00000363919 148 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC066692.1-201ENST00000421721 457 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC124944.2-201ENST00000429866 1242 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC005297.1-201ENST00000444765 862 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC118758.1-202ENST00000454719 225 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC245028.2-201ENST00000458673 253 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC021660.1-201ENST00000465006 554 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 MRPS21P7-201ENST00000566937 238 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AC127024.5-201ENST00000580085 462 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 PPATP2-201ENST00000605635 508 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AL450345.1-202ENST00000605741 3881 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AL359091.2-201ENST00000609303 556 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 MIR6839-201ENST00000620425 113 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AL591926.1-201ENST00000620542 217 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 AP003400.3-201ENST00000624904 346 ntBASIC5.1□□□□□ -1.59
VAPAQ9P0L0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.1□□□□□ -1.59
VAPAQ9P0L0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AC114786.1-201ENST00000512892 1415 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 OR9G4-201ENST00000302957 984 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 RPL21P67-201ENST00000402896 478 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AC069154.1-201ENST00000432914 542 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AC090018.1-201ENST00000434369 367 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AC110602.1-201ENST00000437414 318 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AP006222.1-205ENST00000450734 457 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AC092754.1-201ENST00000472975 479 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 RPS24P16-201ENST00000497294 392 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 RN7SKP183-201ENST00000517169 324 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AC060775.1-201ENST00000518241 520 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms