Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AL391422.1-201ENST00000402155 436 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 Z93019.1-201ENST00000416450 973 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 RPS29P14-201ENST00000431518 171 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 RPL19P16-201ENST00000433839 588 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 GSTM5P1-201ENST00000434751 660 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 RPS24P16-201ENST00000497294 392 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AC015720.2-201ENST00000567709 334 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 FO393422.1-201ENST00000603908 708 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AL022394.1-201ENST00000606979 292 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AC000068.2-201ENST00000608816 460 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AC109583.2-201ENST00000617367 129 ntBASIC5.39□□□□□ -1.55
TREX1Q9NSU2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TREX1Q9NSU2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 MIR133B-201ENST00000362210 119 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AL138899.2-201ENST00000439139 499 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 RANP1-206ENST00000455094 651 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 CBX1P5-201ENST00000475330 559 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC058823.1-201ENST00000485315 474 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC090638.1-201ENST00000498296 909 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC016559.2-201ENST00000510759 359 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC098976.1-201ENST00000513014 541 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC112191.2-201ENST00000522428 333 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC027369.5-201ENST00000533838 755 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 RN7SL787P-201ENST00000613000 284 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC026367.3-201ENST00000619032 590 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 AC127024.6-201ENST00000621598 424 ntBASIC5.38□□□□□ -1.55
TREX1Q9NSU2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TREX1Q9NSU2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TREX1Q9NSU2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms