Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AL731534.1-201ENST00000434711 269 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 CR769776.1-201ENST00000441254 787 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC016908.1-201ENST00000442571 1219 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 RPS27P5-201ENST00000444247 244 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 MORF4-201ENST00000447135 971 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC087672.1-201ENST00000479876 766 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 RN7SL413P-201ENST00000482700 297 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC147055.3-201ENST00000510547 851 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 OR6M2P-201ENST00000529831 871 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 RPL3P13-201ENST00000550415 216 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC037479.1-201ENST00000558361 625 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AL356801.1-201ENST00000559320 294 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC093524.1-201ENST00000564266 1094 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC021483.2-201ENST00000567415 758 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 MTND3P13-201ENST00000574391 343 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 SYPL1P2-201ENST00000582878 727 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 MIR132-201ENST00000591554 101 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 PCNAP1-202ENST00000595299 752 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AP003399.1-201ENST00000637534 361 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 MTND4P8-201ENST00000514997 1362 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 AL592429.1-201ENST00000403909 1473 ntBASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.76□□□□□ -1.49
AMBRA1Q9C0C7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 SNORD1C-201ENST00000363315 78 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC007068.1-201ENST00000396690 844 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AL391422.1-201ENST00000402155 436 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 RN7SKP17-201ENST00000411242 351 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 RPL22P18-201ENST00000417197 377 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 GPN3P1-201ENST00000423883 535 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 RPL5P2-201ENST00000429598 854 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 RPS6P15-201ENST00000431996 751 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 RPS3AP38-201ENST00000435889 763 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 GTF2IP14-201ENST00000441415 586 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 OR7E22P-201ENST00000478335 1035 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC093719.1-201ENST00000480427 441 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms