Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 RBMY2KP-201ENST00000418221 992 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AL356276.2-201ENST00000435919 558 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 MTAPP2-201ENST00000437063 832 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 RSU1P2-202ENST00000437884 485 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 RPS15AP9-201ENST00000439856 381 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 RPSAP76-201ENST00000444599 853 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC242426.2-201ENST00000446956 795 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 MTND6P5-201ENST00000448266 512 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC239798.3-201ENST00000454459 408 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 MED28P8-201ENST00000454831 521 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 Y_RNA.635-201ENST00000459041 101 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 RNU7-63P-201ENST00000459054 62 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 VN1R17P-201ENST00000472048 1090 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 RPL12P31-201ENST00000478433 450 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 RN7SL135P-201ENST00000490144 278 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 TMEM248P1-201ENST00000510579 951 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC087360.1-201ENST00000518788 616 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 IGKV2D-14-201ENST00000522473 355 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC008083.2-201ENST00000546707 476 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC007255.2-201ENST00000604053 631 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 AL365434.2-201ENST00000607979 234 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC018926.2-201ENST00000611214 498 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 MIR6505-201ENST00000617206 71 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 OR1N1-202ENST00000619659 939 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 SEM1-224ENST00000623693 729 ntTSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC079597.1-201ENST00000624306 508 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 OLMALINC-206ENST00000641799 1195 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USB1Q9BQ65 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USB1Q9BQ65 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
USB1Q9BQ65 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
USB1Q9BQ65 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USB1Q9BQ65 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
USB1Q9BQ65 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.46□□□□□ -1.21
USB1Q9BQ65 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC7.46□□□□□ -1.21
USB1Q9BQ65 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USB1Q9BQ65 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC7.46□□□□□ -1.21
USB1Q9BQ65 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USB1Q9BQ65 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
USB1Q9BQ65 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.46□□□□□ -1.21
USB1Q9BQ65 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
USB1Q9BQ65 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
USB1Q9BQ65 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 RN7SKP10-201ENST00000364291 325 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC073621.2-201ENST00000381380 1024 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 SNORA20.2-201ENST00000383922 131 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 RNU6-1222P-201ENST00000384615 107 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 MIR548F4-201ENST00000408515 105 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AL357752.1-201ENST00000412817 349 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC092042.2-201ENST00000417304 331 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AL807761.1-201ENST00000417622 171 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 HSPE1P1-201ENST00000421494 318 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 Z97634.1-203ENST00000435229 471 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 MTND2P29-201ENST00000438595 412 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms