Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPRD1AQ96P16 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
RPRD1AQ96P16 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.71□□□□□ -1.49
RPRD1AQ96P16 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.71□□□□□ -1.49
RPRD1AQ96P16 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RPRD1AQ96P16 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RPRD1AQ96P16 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC010740.1-201ENST00000417035 684 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC092106.1-201ENST00000444291 373 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 RANP1-206ENST00000455094 651 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC090638.1-201ENST00000498296 909 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 OR5AM1P-201ENST00000532136 1032 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC122688.1-201ENST00000541494 223 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 RN7SL753P-201ENST00000581238 290 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC010245.2-201ENST00000606908 1167 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC079395.2-201ENST00000610982 737 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 MIR8080-201ENST00000622224 89 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 TET1P1-201ENST00000426627 2301 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 AC004076.2-201ENST00000620532 3323 ntBASIC5.71□□□□□ -1.5
RPRD1AQ96P16 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RPRD1AQ96P16 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 SAMM50P1-201ENST00000455403 1399 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 MTCO1P11-201ENST00000429111 1528 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 RNA5SP132-201ENST00000364725 118 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 EI24P3-201ENST00000399046 1062 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 RN7SKP17-201ENST00000411242 351 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 RPSAP35-201ENST00000413753 818 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AC007161.1-204ENST00000423039 460 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 VTI1BP4-201ENST00000427516 527 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AC073072.2-201ENST00000447425 348 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 SNORD125-201ENST00000459538 96 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AC018638.3-201ENST00000461273 132 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 RN7SL184P-201ENST00000488308 297 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 EIF3LP3-201ENST00000495197 822 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 RPS17P5-201ENST00000498293 408 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AC019322.1-201ENST00000571869 389 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AC090286.3-201ENST00000573133 187 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 MTCO1P46-201ENST00000451639 1491 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 AC093849.1-201ENST00000563631 2209 ntBASIC5.7□□□□□ -1.5
RPRD1AQ96P16 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RPRD1AQ96P16 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms